RNA–Protein interactions for RNA: ENST00000515981.1

SCARNA16-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16-201ENST00000515981 PRDM10Q9NQV6 1147 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 HOMER2Q9NSB8 354 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 GABRQQ9UN88 632 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
SCARNA16-201ENST00000515981 GOLGA8AA7E2F4 631 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 GOLGA8BA8MQT2 603 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 PPFIA3O75145 1194 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 ALAS1P13196 640 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 FCGRTP55899 365 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 CCT2P78371 535 aaKnown RBP11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 STK3Q13188 491 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 KIF22Q14807 665 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 RTN1Q16799 776 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 OTOP1Q7RTM1 612 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 PLEKHH3Q7Z736 793 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 FBXL16Q8N461 479 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 PIGSQ96S52 555 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 TPCN1Q9ULQ1 816 aa11.31□□□□□ -0.6
SCARNA16-201ENST00000515981 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CALM1P0DP23 149 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CALM2P0DP24 149 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CALM3P0DP25 149 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 KIF5BP33176 963 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CCNA1P78396 465 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 TMTC3Q6ZXV5 915 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 HOMER1Q86YM7 354 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 RIOX2Q8IUF8 465 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 MAP3K14Q99558 947 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 ALDH8A1Q9H2A2 487 aaPredicted RBP11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 RIOX1Q9H6W3 641 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CWC22Q9HCG8 908 aaKnown RBP11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 GJD2Q9UKL4 321 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
SCARNA16-201ENST00000515981 ATP2A1O14983 1001 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 LARGE1O95461 756 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 CYP2B6P20813 491 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 PTPREP23469 700 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 MAPK4P31152 587 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 EVCP57679 992 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 PRKCZQ05513 592 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 FUT2Q10981 343 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 USH1GQ495M9 461 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 MUM1L1Q5H9M0 696 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 CTU1Q7Z7A3 348 aaKnown RBP11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 COA7Q96BR5 231 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 MTMR8Q96EF0 704 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 TRERF1Q96PN7 1200 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 SRRDQ9UH36 339 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 MGAMO43451 1857 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
SCARNA16-201ENST00000515981 COBLO75128 1261 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 SLC25A27O95847 323 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 ICAM1P05362 532 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 PGK2P07205 417 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 FDX1P10109 184 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 FLT3LGP49771 235 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 GNAQP50148 359 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 OAZ1P54368 228 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 MORN1Q5T089 497 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 ZNF274Q96GC6 653 aaPredicted RBP11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 SPZ1Q9BXG8 430 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 MROH8Q9H579 483 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 V9GY48 417 aaPredicted RBP11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 ZNFX1Q9P2E3 1918 aaKnown RBP11.28□□□□□ -0.6
SCARNA16-201ENST00000515981 PNMA6FA0A0J9YX94 578 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 ZBTB5O15062 677 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 ELNP15502 786 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 ADORA2AP29274 412 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 SCRN1Q12765 414 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 RABEP1Q15276 862 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 ME3Q16798 604 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 FBXO11Q86XK2 927 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 CLEC4DQ8WXI8 215 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 USP6NLQ92738 828 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 PHKBQ93100 1093 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 MMP19Q99542 508 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 MCOLN1Q9GZU1 580 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 RBM28Q9NW13 759 aaKnown RBP11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 PTPN22Q9Y2R2 807 aa11.27□□□□□ -0.61
SCARNA16-201ENST00000515981 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 NFIBO00712 420 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 PFKFB2O60825 505 aa11.26□□□□□ -0.61
SCARNA16-201ENST00000515981 FCER1AP12319 257 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms