RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 SHMT1P34896 483 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 RNF180Q86T96 592 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 ZNF589Q86UQ0 364 aaPredicted RBP11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 MTIF3Q9H2K0 278 aaKnown RBP11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 IL23AQ9NPF7 189 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 XPNPEP3Q9NQH7 507 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 C5orf42Q9H799 3197 aa11.14□□□□□ -0.63
CSNK1A1-206ENST00000515748 DOCK1Q14185 1865 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L21D6R901 530 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 PGK1P00558 417 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 ASNSP08243 561 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 CHMLP26374 656 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 PTPN5P54829 565 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 C16orf86Q6ZW13 317 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 CERS4Q9HA82 394 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
CSNK1A1-206ENST00000515748 ZNF318Q5VUA4 2279 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 EPOPA6NHQ4 379 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 CYP2D6P10635 497 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 RARBP10826 455 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 TDO2P48775 406 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 VPS53Q5VIR6 699 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 CWC27Q6UX04 472 aaKnown RBP11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 NAPBQ9H115 298 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 STARD7Q9NQZ5 370 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 ZBTB21Q9ULJ3 1066 aa11.12□□□□□ -0.63
CSNK1A1-206ENST00000515748 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 STRNO43815 780 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 APPP05067 770 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 NT5C2P49902 561 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 CDK7P50613 346 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 EVX2Q03828 476 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 IER5LQ5T953 404 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 RUFY2Q8WXA3 655 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 DSCC1Q9BVC3 393 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 ZNF287Q9HBT7 754 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 EMILIN3Q9NT22 766 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 BTBD7Q9P203 1132 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
CSNK1A1-206ENST00000515748 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 SGSM2O43147 1006 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 COBLO75128 1261 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 FGRP09769 529 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 ADORA2AP29274 412 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 CYP2C18P33260 490 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 CDK8P49336 464 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 ACLYP53396 1101 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 JAG1P78504 1218 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 PPARAQ07869 468 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 ABCB5Q2M3G0 1257 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 TMEM67Q5HYA8 995 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 CCDC17Q96LX7 622 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 IL25Q9H293 177 aa11.1□□□□□ -0.63
CSNK1A1-206ENST00000515748 MYH1P12882 1939 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 BRWD1Q9NSI6 2320 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 GDF11O95390 407 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 GH2P01242 217 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 FGAP02671 866 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 CA3P07451 260 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 SLC3A2P08195 630 aaKnown RBP11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 PCP11498 1178 aaKnown RBP11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 IL9P15248 144 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 LEXMQ3ZCV2 418 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 TMEM179Q6ZVK1 233 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 ARNTL2Q8WYA1 636 aa11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSNK1A1-206ENST00000515748 ORC4O43929 436 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 RASA1P20936 1047 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 GUCY1A2P33402 732 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 PDE4BQ07343 736 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 TCF15Q12870 199 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 GRB10Q13322 594 aa11.08□□□□□ -0.64
CSNK1A1-206ENST00000515748 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms