RNA–Protein interactions for RNA: ENST00000515746.5

ATXN3-212, Transcript of ataxin 3, human

TSL 5

Gene ATXN3, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-212	ENST00000515746	PHKA1	P46020	1223 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTSW	P56202	376 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SEMA3F	Q13275	785 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	GNL2	Q13823	731 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SAFB	Q15424	915 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CHRNA2	Q15822	529 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZSCAN26	Q16670	478 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	RTN1	Q16799	776 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	HSP90AA4P	Q58FG1	418 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SPECC1	Q5M775	1068 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	AKNAD1	Q5T1N1	836 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	NFXL1	Q6ZNB6	911 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	HDX	Q7Z353	690 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	NLRP10	Q86W26	655 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	IFNL3	Q8IZI9	196 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	IGSF22	Q8N9C0	903 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZCRB1	Q8TBF4	217 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CCDC12	Q8WUD4	166 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	TNFRSF25	Q93038	417 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	FAM89A	Q96GI7	184 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CCDC34	Q96HJ3	373 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CALR3	Q96L12	384 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	PRKD2	Q9BZL6	878 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CSRNP2	Q9H175	543 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	GREM2	Q9H772	168 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CNNM2	Q9H8M5	875 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	PDE11A	Q9HCR9	933 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZSWIM5	Q9P217	1185 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	LCMT1	Q9UIC8	334 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	ADAM21	Q9UKJ8	722 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	KCNJ14	Q9UNX9	436 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	TTF2	Q9UNY4	1162 aa	Known RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SLC12A7	Q9Y666	1083 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746		V9GY48	417 aa	Predicted RBP	5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	SPATA31A3	Q5VYP0	1347 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	PNPLA7	Q6ZV29	1317 aa		5.63	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE9	A4FU28	777 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	TRIM75P	A6NK02	468 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	RNF225	M0QZC1	329 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	IDH1	O75874	414 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	MBD4	O95243	580 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	PDE8B	O95263	885 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	BMP15	O95972	392 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	CDK11B	P21127	795 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ITGA6	P23229	1130 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	AARS	P49588	968 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	FXR1	P51114	621 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	GYS2	P54840	703 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	MCCD1	P59942	119 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	VSNL1	P62760	191 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ERVK-24	P63145	666 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	NR5A1	Q13285	461 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	KRT31	Q15323	416 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	SEC23A	Q15436	765 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	NPY5R	Q15761	445 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ERFE	Q4G0M1	354 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	RC3H1	Q5TC82	1133 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	WDR93	Q6P2C0	686 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ZNF598	Q86UK7	904 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	PPFIBP1	Q86W92	1011 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	DZIP3	Q86Y13	1208 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	TMTC1	Q8IUR5	882 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	CNGA4	Q8IV77	575 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	TRIM22	Q8IYM9	498 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	FAM177A1	Q8N128	213 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	SYNE4	Q8N205	404 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	SLC35F6	Q8N357	371 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	NOA1	Q8NC60	698 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	EHBP1	Q8NDI1	1231 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	GLMN	Q92990	594 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	FERMT2	Q96AC1	680 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	GSDMA	Q96QA5	445 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	CTAGE1	Q96RT6	745 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	NAPG	Q99747	312 aa	Predicted RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	KRT23	Q9C075	422 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	VIPAS39	Q9H9C1	493 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ABCB6	Q9NP58	842 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	MYO1A	Q9UBC5	1043 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	ANAPC4	Q9UJX5	808 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	CEP131	Q9UPN4	1083 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	REXO2	Q9Y3B8	237 aa	Known RBP	5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	PCDHB9	Q9Y5E1	797 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	SYNRG	Q9UMZ2	1314 aa		5.62	□□□□□ -1.51
ATXN3-212	ENST00000515746	CCDC196	A0A1B0GTZ2	297 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ANKRD18B	A2A2Z9	1011 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PSMD14	O00487	310 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	WNT7A	O00755	349 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PRKAB2	O43741	272 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	N4BP1	O75113	896 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ERLIN1	O75477	346 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	ABL1	P00519	1130 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	TFRC	P02786	760 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	APP	P05067	770 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	IVL	P07476	585 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	CASP14	P31944	242 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	XDH	P47989	1333 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	COPB1	P53618	953 aa	Known RBP	5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	RASGRF1	Q13972	1273 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PPP2R5B	Q15173	497 aa		5.61	□□□□□ -1.51
ATXN3-212	ENST00000515746	PUM3	Q15397	648 aa	Known RBP	5.61	□□□□□ -1.51

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