RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
CLDND1-231ENST00000515620 WNT8AQ9H1J5 351 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 GOPCQ9HD26 462 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 COG5Q9UP83 839 aa12.68□□□□□ -0.38
CLDND1-231ENST00000515620 EPOPA6NHQ4 379 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 ARMCX2Q7L311 632 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 ZNF467Q7Z7K2 595 aaPredicted RBP12.67□□□□□ -0.38
CLDND1-231ENST00000515620 CLUAP1Q96AJ1 413 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 SCLYQ96I15 445 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
CLDND1-231ENST00000515620 SLF1Q9BQI6 1058 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 TRPV6Q9H1D0 765 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 ABHD16BQ9H3Z7 469 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 RIPK3Q9Y572 518 aa12.67□□□□□ -0.38
CLDND1-231ENST00000515620 ZNF532Q9HCE3 1301 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-231ENST00000515620 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 POU3F3P20264 500 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-231ENST00000515620 CDK8P49336 464 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 NOL8Q76FK4 1167 aaKnown RBP12.66□□□□□ -0.38
CLDND1-231ENST00000515620 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
CLDND1-231ENST00000515620 CPXCR1Q8N123 301 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
CLDND1-231ENST00000515620 HLA-CQ95604 372 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 FGD4Q96M96 766 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 C1orf115Q9H7X2 142 aa12.66□□□□□ -0.38
CLDND1-231ENST00000515620 ASTN1O14525 1302 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 B4GALT4O60513 344 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 ATP8B2P98198 1209 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 TTLL4Q14679 1199 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 TTF1Q15361 905 aaPredicted RBP12.65□□□□□ -0.38
CLDND1-231ENST00000515620 AACSQ86V21 672 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 CCDC144CPQ8IYA2 1237 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 ARNTL2Q8WYA1 636 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 VWCEQ96DN2 955 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 ARMT1Q9H993 441 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 KANSL2Q9H9L4 492 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 NOP58Q9Y2X3 529 aaKnown RBP12.65□□□□□ -0.38
CLDND1-231ENST00000515620 TRANK1O15050 2925 aa12.65□□□□□ -0.38
CLDND1-231ENST00000515620 GRIN2DO15399 1336 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 MCM3APO60318 1980 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 IPO8O15397 1037 aaKnown RBP12.64□□□□□ -0.39
CLDND1-231ENST00000515620 PRKAB2O43741 272 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 CABYRO75952 493 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 PTGS1P23219 599 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 PSMC6P62333 389 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 TNFAIP2Q03169 654 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 FSCN1Q16658 493 aaKnown RBP12.64□□□□□ -0.39
CLDND1-231ENST00000515620 C16orf86Q6ZW13 317 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
CLDND1-231ENST00000515620 CD320Q9NPF0 282 aa12.64□□□□□ -0.39
CLDND1-231ENST00000515620 CTDP1Q9Y5B0 961 aaPredicted RBP12.64□□□□□ -0.39
CLDND1-231ENST00000515620 TCRBV5S4A2TA0A5A2 114 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 PI4K2BG5E9Z4 385 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 ARHGEF15O94989 841 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 MBD4O95243 580 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 MRE11P49959 708 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 NKX3-2P78367 333 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 C12orf60Q5U649 245 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 DEFB128Q7Z7B8 93 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 DNAJC2Q99543 621 aaKnown RBP12.63□□□□□ -0.39
CLDND1-231ENST00000515620 ATP8A2Q9NTI2 1148 aa12.63□□□□□ -0.39
CLDND1-231ENST00000515620 COL4A4P53420 1690 aaPredicted RBP12.63□□□□□ -0.39
CLDND1-231ENST00000515620 USP17L12C9JPN9 530 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 USP17L21D6R901 530 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 GOLIM4O00461 696 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 ATP2A1O14983 1001 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 ZBED4O75132 1171 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 PFKMP08237 780 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 CNTN2Q02246 1040 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 TAP1Q03518 808 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 GRB10Q13322 594 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 PRPF38AQ8NAV1 312 aaKnown RBP12.62□□□□□ -0.39
CLDND1-231ENST00000515620 KIFC2Q96AC6 838 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 AP5M1Q9H0R1 490 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 HOMER2Q9NSB8 354 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
CLDND1-231ENST00000515620 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
CLDND1-231ENST00000515620 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
CLDND1-231ENST00000515620 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
CLDND1-231ENST00000515620 DYNC1LI2O43237 492 aaPredicted RBP12.61□□□□□ -0.39
CLDND1-231ENST00000515620 ZEB2O60315 1214 aa12.61□□□□□ -0.39
CLDND1-231ENST00000515620 NDUFB10O96000 172 aa12.61□□□□□ -0.39
CLDND1-231ENST00000515620 CYP2C9P11712 490 aa12.61□□□□□ -0.39
CLDND1-231ENST00000515620 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
CLDND1-231ENST00000515620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms