RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 USP17L24Q0WX57 530 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 AMHR2Q16671 573 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 ABCB5Q2M3G0 1257 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 AACSQ86V21 672 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 C12orf42Q96LP6 360 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 EXOC6BQ9Y2D4 811 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
CDC42SE2-212ENST00000515533 POLR3DP05423 398 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 RLBP1P12271 317 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 SYN1P17600 705 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 BMP8BP34820 402 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 CACNB2Q08289 660 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 TTF1Q15361 905 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 HSP90AB4PQ58FF6 505 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 CEP85Q6P2H3 762 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 RETREG3Q86VR2 466 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 GDF15Q99988 308 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 ANTXR1Q9H6X2 564 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 IVNS1ABPQ9Y6Y0 642 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 MYH4Q9Y623 1939 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 CUL9Q8IWT3 2517 aa10.78□□□□□ -0.68
CDC42SE2-212ENST00000515533 MAGEB6P1A0A0J9YX57 407 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 H3BM21 787 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 SOX1O00570 391 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 VCAM1P19320 739 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 CCND3P30281 292 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 CCL14Q16627 93 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 MFSD14CQ5VZR4 134 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 CATSPERGQ6ZRH7 1159 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 USP6NLQ92738 828 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 EDC3Q96F86 508 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 KIAA1683Q9H0B3 1180 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 UNC80Q8N2C7 3258 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 PFASO15067 1338 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 LTBP2Q14767 1821 aa10.77□□□□□ -0.69
CDC42SE2-212ENST00000515533 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 SHMT1P34896 483 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 MAGEA10P43363 369 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 PLCD1P51178 756 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 SLC9C2Q5TAH2 1124 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 TDHQ8IZJ6 230 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 CLASRPQ8N2M8 674 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 ACER1Q8TDN7 264 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 RIOK1Q9BRS2 568 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 UBE2OQ9C0C9 1292 aaKnown RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 RPAP3Q9H6T3 665 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 IL1RAPL2Q9NP60 686 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 MCM9Q9NXL9 1143 aa10.76□□□□□ -0.69
CDC42SE2-212ENST00000515533 SLC15A5A6NIM6 579 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 APBB1O00213 710 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 MSCO60682 206 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 COL6A1P12109 1028 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 CNGA1P29973 690 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 SH3BP2P78314 561 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 ATP2B2Q01814 1243 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 LBX2Q6XYB7 198 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 PARP9Q8IXQ6 854 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 RHPN1Q8TCX5 695 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 DNAJC2Q99543 621 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 TANGO6Q9C0B7 1094 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 MCM3APO60318 1980 aa10.75□□□□□ -0.69
CDC42SE2-212ENST00000515533 GOLIM4O00461 696 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 CNMDO75829 334 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 IFIT2P09913 472 aaKnown RBP10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 MS4A1P11836 297 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 PDE6AP16499 860 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 GRB14Q14449 540 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 COG2Q14746 738 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 SEPT2Q15019 361 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 LRIT3Q3SXY7 679 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 DPP9Q86TI2 863 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 SDR42E1Q8WUS8 393 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 KIF1BPQ96EK5 621 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 BTBD7Q9P203 1132 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 MYO9BQ13459 2157 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 ZNF532Q9HCE3 1301 aa10.74□□□□□ -0.69
CDC42SE2-212ENST00000515533 HMMRO75330 724 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 HOXC6P09630 235 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 GABPAQ06546 454 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 LRRC26Q2I0M4 334 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 SENP6Q9GZR1 1112 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 HOXC10Q9NYD6 342 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 FLRT1Q9NZU1 646 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 PRKAG2Q9UGJ0 569 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 SWAP70Q9UH65 585 aa10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 DDX20Q9UHI6 824 aaKnown RBP10.73□□□□□ -0.69
CDC42SE2-212ENST00000515533 STRNO43815 780 aa10.72□□□□□ -0.69
CDC42SE2-212ENST00000515533 CCNYL3P0C7X3 344 aa10.72□□□□□ -0.69
CDC42SE2-212ENST00000515533 CYP2C19P33261 490 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms