RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RASGRP2Q7LDG7 609 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 RALYLQ86SE5 291 aaKnown RBP14.99□□□□□ -0.01
CLCN3-210ENST00000515420 MSL3Q8N5Y2 521 aaKnown RBP14.99□□□□□ -0.01
CLCN3-210ENST00000515420 NCOA7Q8NI08 942 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 MAML3Q96JK9 1138 aa14.99□□□□□ -0.01
CLCN3-210ENST00000515420 RANBP17Q9H2T7 1088 aaKnown RBP14.99□□□□□ -0.01
CLCN3-210ENST00000515420 DNAJC25-GNG10A0A024R161 153 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 E7EWF7 191 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 TFRCP02786 760 aaKnown RBP14.98□□□□□ -0.01
CLCN3-210ENST00000515420 ICAM1P05362 532 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 CYBAP13498 195 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 SEC23AQ15436 765 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 SYDE2Q5VT97 1194 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 MTA3Q9BTC8 594 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 ACAD9Q9H845 621 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 PPP4R2Q9NY27 417 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 OGDHLQ9ULD0 1010 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 MTMR7Q9Y216 660 aa14.98□□□□□ -0.01
CLCN3-210ENST00000515420 FARP2O94887 1054 aaPredicted RBP14.97□□□□□ -0.01
CLCN3-210ENST00000515420 SART3Q15020 963 aaKnown RBP14.97□□□□□ -0.01
CLCN3-210ENST00000515420 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
CLCN3-210ENST00000515420 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
CLCN3-210ENST00000515420 ZNF467Q7Z7K2 595 aaPredicted RBP14.97□□□□□ -0.01
CLCN3-210ENST00000515420 DDX11Q96FC9 970 aa14.97□□□□□ -0.01
CLCN3-210ENST00000515420 PFASO15067 1338 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 FRMPD2Q68DX3 1309 aaPredicted RBP14.96□□□□□ -0.01
CLCN3-210ENST00000515420 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 ERICH2A1L162 156 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 PGK2P07205 417 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 CCND3P30281 292 aaPredicted RBP14.96□□□□□ -0.01
CLCN3-210ENST00000515420 CYP2C19P33261 490 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 NECTIN1Q15223 517 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 MAMDC4Q6UXC1 1216 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 CYB5R4Q7L1T6 521 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 AGBL1Q96MI9 1066 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 TINF2Q9BSI4 451 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 GPCPD1Q9NPB8 672 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 ANO2Q9NQ90 1003 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 RNF146Q9NTX7 359 aa14.96□□□□□ -0.01
CLCN3-210ENST00000515420 SMCHD1A6NHR9 2005 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 SYNGAP1Q96PV0 1343 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 SEPT4O43236 478 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 SLC16A2P36021 539 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 RNF20Q5VTR2 975 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 LHX8Q68G74 356 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 STOX1Q6ZVD7 989 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 MB21D2Q8IYB1 491 aaPredicted RBP14.95□□□□□ -0.02
CLCN3-210ENST00000515420 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 HTATIP2Q9BUP3 242 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 MAF1Q9H063 256 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 DDX20Q9UHI6 824 aaKnown RBP14.95□□□□□ -0.02
CLCN3-210ENST00000515420 CCPG1Q9ULG6 757 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 MYH6P13533 1939 aa14.95□□□□□ -0.02
CLCN3-210ENST00000515420 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
CLCN3-210ENST00000515420 SLC27A2O14975 620 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 PARP1P09874 1014 aaKnown RBP14.94□□□□□ -0.02
CLCN3-210ENST00000515420 ALAS1P13196 640 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 SLC4A3P48751 1232 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 PRPF38BQ5VTL8 546 aaKnown RBP14.94□□□□□ -0.02
CLCN3-210ENST00000515420 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 NECAB2Q7Z6G3 386 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 TRPV1Q8NER1 839 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 CHMP4CQ96CF2 233 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 A1CFQ9NQ94 594 aaKnown RBP14.94□□□□□ -0.02
CLCN3-210ENST00000515420 HOMER2Q9NSB8 354 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 TAF6LQ9Y6J9 622 aa14.94□□□□□ -0.02
CLCN3-210ENST00000515420 MCM3APO60318 1980 aa14.93□□□□□ -0.02
CLCN3-210ENST00000515420 WTAPQ15007 396 aa14.93□□□□□ -0.02
CLCN3-210ENST00000515420 CREB3L3Q68CJ9 461 aa14.93□□□□□ -0.02
CLCN3-210ENST00000515420 FAM133AQ8N9E0 248 aa14.93□□□□□ -0.02
CLCN3-210ENST00000515420 CNPY2Q9Y2B0 182 aa14.93□□□□□ -0.02
CLCN3-210ENST00000515420 LCTP09848 1927 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 LOC102724159A0A0B4J2E5 919 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 GOLGA8HP0CJ92 632 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 CNGA1P29973 690 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 MCM5P33992 734 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
CLCN3-210ENST00000515420 ANTXR2P58335 489 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 SNAP25P60880 206 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 PWP2Q15269 919 aaKnown RBP14.92□□□□□ -0.02
CLCN3-210ENST00000515420 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 TMTC2Q8N394 836 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 IGDCC4Q8TDY8 1250 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 TMEM87BQ96K49 555 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 FGD4Q96M96 766 aa14.92□□□□□ -0.02
CLCN3-210ENST00000515420 ASB14A6NK59 587 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 POTEB2H3BUK9 544 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 MUM1L1Q5H9M0 696 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 TMEM67Q5HYA8 995 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 ADGRF4Q8IZF3 695 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 PAWRQ96IZ0 340 aaKnown RBP14.91□□□□□ -0.02
CLCN3-210ENST00000515420 MAP3K14Q99558 947 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 ABHD16BQ9H3Z7 469 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 CYP39A1Q9NYL5 469 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
CLCN3-210ENST00000515420 ALPK3Q96L96 1907 aa14.9□□□□□ -0.02
CLCN3-210ENST00000515420 LRRC37A2A6NM11 1700 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms