RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 RNF146Q9NTX7 359 aa15.37■□□□□ 0.05
CDK7-213ENST00000515391 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
CDK7-213ENST00000515391 RAD50Q92878 1312 aa15.37■□□□□ 0.05
CDK7-213ENST00000515391 SMCHD1A6NHR9 2005 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 DNAJC25-GNG10A0A024R161 153 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 SGSM2O43147 1006 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 GOLGA8HP0CJ92 632 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 FDX1P10109 184 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 MUM1L1Q5H9M0 696 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 SYDE2Q5VT97 1194 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
CDK7-213ENST00000515391 CHST13Q8NET6 341 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 FGD4Q96M96 766 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 CPVLQ9H3G5 476 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 PCDH10Q9P2E7 1040 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 DIS3Q9Y2L1 958 aaKnown RBP15.36■□□□□ 0.05
CDK7-213ENST00000515391 PFASO15067 1338 aa15.36■□□□□ 0.05
CDK7-213ENST00000515391 MKI67P46013 3256 aaKnown RBP15.35■□□□□ 0.05
CDK7-213ENST00000515391 SEPT4O43236 478 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 EVI5O60447 810 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 CYP21A2P08686 494 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 CNTN2Q02246 1040 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 ZNF543Q08ER8 600 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 GJC2Q5T442 439 aaPredicted RBP15.35■□□□□ 0.05
CDK7-213ENST00000515391 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 CYB5R4Q7L1T6 521 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 IQCA1Q86XH1 822 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 DGKHQ86XP1 1220 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 TRERF1Q96PN7 1200 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 ZSCAN10Q96SZ4 725 aaPredicted RBP15.35■□□□□ 0.05
CDK7-213ENST00000515391 KRT23Q9C075 422 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 ACAD9Q9H845 621 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 CCPG1Q9ULG6 757 aa15.35■□□□□ 0.05
CDK7-213ENST00000515391 MSCO60682 206 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 SNAI1O95863 264 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 ZNF865P0CJ78 1059 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 SNHG28P0DPA3 235 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 COL6A1P12109 1028 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDK7-213ENST00000515391 C7orf61Q8IZ16 206 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 ENAHQ8N8S7 591 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 PNMA1Q8ND90 353 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 LENG1Q96BZ8 264 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 PURBQ96QR8 312 aaKnown RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 UBA5Q9GZZ9 404 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 RANBP17Q9H2T7 1088 aaKnown RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 KAT14Q9H8E8 782 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 A1CFQ9NQ94 594 aaKnown RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 FBXO40Q9UH90 709 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 COLQQ9Y215 455 aaPredicted RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 DDX49Q9Y6V7 483 aaKnown RBP15.34■□□□□ 0.05
CDK7-213ENST00000515391 TNKSO95271 1327 aa15.34■□□□□ 0.05
CDK7-213ENST00000515391 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
CDK7-213ENST00000515391 ZMYND8Q9ULU4 1186 aaPredicted RBP15.33■□□□□ 0.04
CDK7-213ENST00000515391 NR2E3Q9Y5X4 410 aa15.33■□□□□ 0.04
CDK7-213ENST00000515391 MCM3APO60318 1980 aa15.33■□□□□ 0.04
CDK7-213ENST00000515391 SOWAHBA6NEL2 793 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 POTEB2H3BUK9 544 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 ICAM1P05362 532 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 LRRC26Q2I0M4 334 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 TKFCQ3LXA3 575 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 MAMDC4Q6UXC1 1216 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 STOX1Q6ZVD7 989 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 CHST3Q7LGC8 479 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 UBAC1Q9BSL1 405 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 CNNM2Q9H8M5 875 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
CDK7-213ENST00000515391 CNPY2Q9Y2B0 182 aa15.32■□□□□ 0.04
CDK7-213ENST00000515391 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
CDK7-213ENST00000515391 E7EWF7 191 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 PGK1P00558 417 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 SYN1P17600 705 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 ATN1P54259 1190 aaPredicted RBP15.31■□□□□ 0.04
CDK7-213ENST00000515391 SEC23AQ15436 765 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 ARMCX2Q7L311 632 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 FAM133AQ8N9E0 248 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 MAP4K1Q92918 833 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
CDK7-213ENST00000515391 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
CDK7-213ENST00000515391 DNM1LO00429 736 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 NFIBO00712 420 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 ASTN1O14525 1302 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 TRDNQ13061 729 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 LRRC41Q15345 812 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 HABP4Q5JVS0 413 aaKnown RBP15.3■□□□□ 0.04
CDK7-213ENST00000515391 IFIT1BQ5T764 474 aaKnown RBP15.3■□□□□ 0.04
CDK7-213ENST00000515391 ZNF467Q7Z7K2 595 aaPredicted RBP15.3■□□□□ 0.04
CDK7-213ENST00000515391 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
CDK7-213ENST00000515391 ARRDC4Q8NCT1 418 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 CCDC136Q96JN2 1154 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 SYNGAP1Q96PV0 1343 aa15.3■□□□□ 0.04
CDK7-213ENST00000515391 LSG1Q9H089 658 aaKnown RBP15.3■□□□□ 0.04
CDK7-213ENST00000515391 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms