RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 CASQ1P31415 396 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 IGSF22Q8N9C0 903 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 TAF4BQ92750 862 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 SRRTQ9BXP5 876 aaKnown RBP11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 POLR3EQ9NVU0 708 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 LRMPQ12912 555 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 GPS2Q13227 327 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 COL9A3Q14050 684 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 RASA3Q14644 834 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 SLC10A5Q5PT55 438 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 NLRX1Q86UT6 975 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 CCDC150Q8NCX0 1101 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 GLG1Q92896 1179 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 GLT8D2Q9H1C3 349 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 AS3MTQ9HBK9 375 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 MRPL11Q9Y3B7 192 aaKnown RBP11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 NFAT5O94916 1531 aa11.08□□□□□ -0.64
RAPGEF6-214ENST00000515170 LRRC41Q15345 812 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 SYDE2Q5VT97 1194 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 TMEM179Q6ZVK1 233 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 MLKLQ8NB16 471 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 TMEM39BQ9GZU3 492 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 MRPL44Q9H9J2 332 aaKnown RBP11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 JADE2Q9NQC1 790 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 BICDL2A1A5D9 508 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 ZNF75DP51815 510 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 SPON1Q9HCB6 807 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 ZNRF3Q9ULT6 936 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 CNOT7Q9UIV1 285 aaKnown RBP11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 GUCA1BQ9UMX6 200 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 PP2D1A8MPX8 630 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 GRIK5Q16478 980 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 HSP90B2PQ58FF3 399 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 STRIP1Q5VSL9 837 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 CNNM4Q6P4Q7 775 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 MIER3Q7Z3K6 550 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 RGS22Q8NE09 1264 aa11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 OSBPL5Q9H0X9 879 aaPredicted RBP11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 LUC7L2Q9Y383 392 aaKnown RBP11.07□□□□□ -0.64
RAPGEF6-214ENST00000515170 FMN2Q9NZ56 1722 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 ASNSP08243 561 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 ADKP55263 362 aaKnown RBP11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 PAF1Q8N7H5 531 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 CRACR2AQ9BSW2 395 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 PEAK1Q9H792 1746 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 SUPT20HL1Q3ZLR7 823 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 SLC51AQ86UW1 340 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 CCDC42Q96M95 316 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 FAM207AQ9NSI2 230 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.06□□□□□ -0.644e-7■■■□□ 16.1
RAPGEF6-214ENST00000515170 TAF3Q5VWG9 929 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 NEK11Q8NG66 645 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 MAP7D2Q96T17 732 aa11.06□□□□□ -0.64
RAPGEF6-214ENST00000515170 POTEMA6NI47 508 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 B4DLN1 442 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 MYCP01106 439 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 SGMS1Q86VZ5 419 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 NAP1L4Q99733 375 aaKnown RBP11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 SUGCTQ9HAC7 445 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 RAVER2Q9HCJ3 691 aaKnown RBP11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 NLRC4Q9NPP4 1024 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 NRBP1Q9UHY1 535 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 RASA1P20936 1047 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 BIRC3Q13489 604 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 LRCH2Q5VUJ6 765 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 RASGRP2Q7LDG7 609 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 CTDNEP1O95476 244 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 CYP2J2P51589 502 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
RAPGEF6-214ENST00000515170 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 PFKFB3Q16875 520 aaPredicted RBP11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 QRICH1Q2TAL8 776 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 GJA10Q969M2 543 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 PNMA6FA0A0J9YX94 578 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 CETN3O15182 167 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 MCM6Q14566 821 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 UTP14CQ5TAP6 766 aaKnown RBP11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 SYT10Q6XYQ8 523 aa11.04□□□□□ -0.64
RAPGEF6-214ENST00000515170 SEPT14Q6ZU15 432 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms