RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 AGBL1Q96MI9 1066 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 DSCC1Q9BVC3 393 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 SLC5A4Q9NY91 659 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 PDHBP11177 359 aa17.31■□□□□ 0.36
SGCA-211ENST00000514934 TOP1P11387 765 aaKnown RBP17.31■□□□□ 0.36
SGCA-211ENST00000514934 SNAP25P60880 206 aa17.31■□□□□ 0.36
SGCA-211ENST00000514934 DCAF4Q8WV16 495 aa17.31■□□□□ 0.36
SGCA-211ENST00000514934 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
SGCA-211ENST00000514934 RANBP17Q9H2T7 1088 aaKnown RBP17.31■□□□□ 0.36
SGCA-211ENST00000514934 A1CFQ9NQ94 594 aaKnown RBP17.31■□□□□ 0.36
SGCA-211ENST00000514934 ZMYND8Q9ULU4 1186 aaPredicted RBP17.31■□□□□ 0.36
SGCA-211ENST00000514934 ADAMTS4O75173 837 aa17.3■□□□□ 0.36
SGCA-211ENST00000514934 LRRC41Q15345 812 aa17.3■□□□□ 0.36
SGCA-211ENST00000514934 RRP12Q5JTH9 1297 aaKnown RBP17.3■□□□□ 0.36
SGCA-211ENST00000514934 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
SGCA-211ENST00000514934 CHURC1Q8WUH1 139 aa17.3■□□□□ 0.36
SGCA-211ENST00000514934 ANKS1AQ92625 1134 aa17.3■□□□□ 0.36
SGCA-211ENST00000514934 DIAPH3Q9NSV4 1193 aa17.3■□□□□ 0.36
SGCA-211ENST00000514934 SOWAHBA6NEL2 793 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 HIP1O00291 1037 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 BMP8BP34820 402 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 MFAP1P55081 439 aaKnown RBP17.29■□□□□ 0.36
SGCA-211ENST00000514934 CNTN2Q02246 1040 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 MUM1L1Q5H9M0 696 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
SGCA-211ENST00000514934 MFSD6Q6ZSS7 791 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 TTC14Q96N46 770 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 RNF146Q9NTX7 359 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 FBXO40Q9UH90 709 aa17.29■□□□□ 0.36
SGCA-211ENST00000514934 A0A1W2PPC1 479 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 SYN1P17600 705 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 SLC16A2P36021 539 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 ZNF543Q08ER8 600 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
SGCA-211ENST00000514934 ACAD9Q9H845 621 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 HOMER2Q9NSB8 354 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 PHF24Q9UPV7 400 aa17.28■□□□□ 0.36
SGCA-211ENST00000514934 SOX1O00570 391 aaPredicted RBP17.27■□□□□ 0.36
SGCA-211ENST00000514934 CTAGE5O15320 804 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 ICAM1P05362 532 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 CHMLP26374 656 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 MAGEA10P43363 369 aaPredicted RBP17.27■□□□□ 0.36
SGCA-211ENST00000514934 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
SGCA-211ENST00000514934 TKFCQ3LXA3 575 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 C1orf53Q5VUE5 145 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 ARRDC4Q8NCT1 418 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 TOMM22Q9NS69 142 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.27■□□□□ 0.36
SGCA-211ENST00000514934 TAF6LQ9Y6J9 622 aa17.27■□□□□ 0.36
SGCA-211ENST00000514934 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.36
SGCA-211ENST00000514934 FRMPD2Q68DX3 1309 aaPredicted RBP17.26■□□□□ 0.35
SGCA-211ENST00000514934 RAD50Q92878 1312 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 SYNRGQ9UMZ2 1314 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 MYADML2A6NDP7 307 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 B4E1Z4 1266 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 ZNF213O14771 459 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 KDM4AO75164 1064 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 PGK1P00558 417 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 NT5C2P49902 561 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 NKX3-2P78367 333 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 PTH1RQ03431 593 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 CCDC174Q6PII3 467 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 SLC39A5Q6ZMH5 540 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 CCDC144CPQ8IYA2 1237 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 ENAHQ8N8S7 591 aaPredicted RBP17.26■□□□□ 0.35
SGCA-211ENST00000514934 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 DDX11Q96FC9 970 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 TRERF1Q96PN7 1200 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 ZKSCAN3Q9BRR0 538 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 RNF41Q9H4P4 317 aaPredicted RBP17.26■□□□□ 0.35
SGCA-211ENST00000514934 XPNPEP3Q9NQH7 507 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 CYP39A1Q9NYL5 469 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 MTMR7Q9Y216 660 aa17.26■□□□□ 0.35
SGCA-211ENST00000514934 ALAS1P13196 640 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 AKR1A1P14550 325 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 ADCYAP1R1P41586 468 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 SLC4A3P48751 1232 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 ATN1P54259 1190 aaPredicted RBP17.25■□□□□ 0.35
SGCA-211ENST00000514934 RTP1P59025 263 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 CCDC96Q2M329 555 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 ANKRD35Q8N283 1001 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 MORC4Q8TE76 937 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 ESR2Q92731 530 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 PURBQ96QR8 312 aaKnown RBP17.25■□□□□ 0.35
SGCA-211ENST00000514934 UPF3AQ9H1J1 476 aaKnown RBP17.25■□□□□ 0.35
SGCA-211ENST00000514934 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 SCN10AQ9Y5Y9 1956 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
SGCA-211ENST00000514934 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 NFIBO00712 420 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 RARBP10826 455 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 ACVR2BQ13705 512 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 SEC23AQ15436 765 aa17.24■□□□□ 0.35
SGCA-211ENST00000514934 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms