RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 GPATCH2Q9NW75 528 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 PLAGL2Q9UPG8 496 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
CLDND1-228ENST00000513873 RNF17Q9BXT8 1623 aaKnown RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 PRR33A8MZF0 331 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 H3BS24 57 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 PAPLNO95428 1278 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 ARID5AQ03989 594 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 BNIP3Q12983 259 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 IKZF1Q13422 519 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 ANGEL2Q5VTE6 544 aaKnown RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 EFCAB2Q5VUJ9 269 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 THAP5Q7Z6K1 395 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 VWDEQ8N2E2 1590 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 RBBP8NLQ8NC74 664 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 SYTL4Q96C24 671 aaPredicted RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 ZSWIM5Q9P217 1185 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 SLC12A7Q9Y666 1083 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 CDK13Q14004 1512 aaKnown RBP6.29□□□□□ -1.4
CLDND1-228ENST00000513873 ROCK1Q13464 1354 aa6.29□□□□□ -1.4
CLDND1-228ENST00000513873 FAM86C2PA6NEL3 165 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 TNFRSF10CO14798 259 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 GUCY2CP25092 1073 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 POLR2BP30876 1174 aaKnown RBP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 TNK2Q07912 1038 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 PLCL1Q15111 1095 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 PPP2R5EQ16537 467 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 UBE2FQ969M7 185 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 MKRN2Q9H000 416 aaKnown RBP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 U3KQE9 123 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 DNMT1P26358 1616 aaKnown RBP6.28□□□□□ -1.4
CLDND1-228ENST00000513873 MLH3Q9UHC1 1453 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 MYO5CQ9NQX4 1742 aa6.28□□□□□ -1.4
CLDND1-228ENST00000513873 CNTNAP4Q9C0A0 1308 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 NEURL4Q96JN8 1562 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 UBOX5O94941 541 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 ZC3H6P61129 1189 aaKnown RBP6.27□□□□□ -1.41
CLDND1-228ENST00000513873 BBS9Q3SYG4 887 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
CLDND1-228ENST00000513873 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
CLDND1-228ENST00000513873 AFAP1Q8N556 730 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 DTWD2Q8NBA8 298 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 PI4K2BQ8TCG2 481 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 ANAPC16Q96DE5 110 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 SLC6A18Q96N87 628 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 SLC9A7Q96T83 725 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 FBXL21Q9UKT6 434 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 ABCA6Q8N139 1617 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 ANKRD30AQ9BXX3 1397 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 RAB3GAP2Q9H2M9 1393 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 PLEKHH2Q8IVE3 1493 aa6.27□□□□□ -1.41
CLDND1-228ENST00000513873 HFM1A2PYH4 1435 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 LRRC7Q96NW7 1537 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 KIF14Q15058 1648 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 DNAJA1P31689 397 aaKnown RBP6.26□□□□□ -1.41
CLDND1-228ENST00000513873 GIPRP48546 466 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 NBPF12Q5TAG4 269 aaPredicted RBP6.26□□□□□ -1.41
CLDND1-228ENST00000513873 TMPRSS7Q7RTY8 843 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 CCDC144CPQ8IYA2 1237 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 R3HCC1Q9Y3T6 440 aaKnown RBP6.26□□□□□ -1.41
CLDND1-228ENST00000513873 ST14Q9Y5Y6 855 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 A2ML1A8K2U0 1454 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 SYNMO15061 1565 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 STRCP1A6NGW2 1772 aa6.26□□□□□ -1.41
CLDND1-228ENST00000513873 PITPNM2Q9BZ72 1349 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 FAM135BQ49AJ0 1406 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 GPATCH8Q9UKJ3 1502 aaKnown RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 SSU72P8A0A1W2PR75 194 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 LRRN2O75325 713 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 CD8BP10966 210 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 TPP2P29144 1249 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 BUD31P41223 144 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 ZP2Q05996 745 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 UNC5AQ6ZN44 842 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 RUFY4Q6ZNE9 571 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 SPRED2Q7Z698 418 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 SLC43A3Q8NBI5 491 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 BHLHE22Q8NFJ8 381 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 ENOX1Q8TC92 643 aaKnown RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 SMARCC1Q92922 1105 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 CCDC120Q96HB5 630 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 ZNF512BQ96KM6 892 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 Q96M66 194 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 GPR62Q9BZJ7 368 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 ATP13A1Q9HD20 1204 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 PAK6Q9NQU5 681 aaPredicted RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 IGSF5Q9NSI5 407 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 LMCD1Q9NZU5 365 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 SUCOQ9UBS9 1254 aaKnown RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 MED14O60244 1454 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 CLTCQ00610 1675 aaKnown RBP6.25□□□□□ -1.41
CLDND1-228ENST00000513873 DEPDC5O75140 1603 aa6.25□□□□□ -1.41
CLDND1-228ENST00000513873 LTKP29376 864 aa6.24□□□□□ -1.41
CLDND1-228ENST00000513873 PMS1P54277 932 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms