RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 ZBED4O75132 1171 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 CALM1P0DP23 149 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 CALM2P0DP24 149 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 CALM3P0DP25 149 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 KIF5BP33176 963 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 QRICH1Q2TAL8 776 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 USH1GQ495M9 461 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 CD99L2Q8TCZ2 262 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 MOV10L1Q9BXT6 1211 aaKnown RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 SPATC1LQ9H0A9 340 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 SAGE1Q9NXZ1 904 aa13.17□□□□□ -0.3
HTT-213ENST00000513806 ZNF214Q9UL59 606 aaPredicted RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 CTDP1Q9Y5B0 961 aaPredicted RBP13.17□□□□□ -0.3
HTT-213ENST00000513806 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 PFKFB2O60825 505 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 GCLCP48506 637 aaPredicted RBP13.16□□□□□ -0.3
HTT-213ENST00000513806 LBX1P52954 281 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 FUT2Q10981 343 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 ANKRD1Q15327 319 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 NTRK3Q16288 839 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 WDR78Q5VTH9 848 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
HTT-213ENST00000513806 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 GPRC5AQ8NFJ5 357 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
HTT-213ENST00000513806 MAP3K14Q99558 947 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 RIOX1Q9H6W3 641 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 MORF4L1Q9UBU8 362 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 NID2Q14112 1375 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 MCM3APO60318 1980 aa13.16□□□□□ -0.3
HTT-213ENST00000513806 ST18O60284 1047 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 ALAS1P13196 640 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 STAT3P40763 770 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 FAM110CQ1W6H9 321 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 MUM1L1Q5H9M0 696 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 NCAPG2Q86XI2 1143 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 COA7Q96BR5 231 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 CFHR5Q9BXR6 569 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
HTT-213ENST00000513806 CCPG1Q9ULG6 757 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
HTT-213ENST00000513806 JAK2O60674 1132 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 ERCC3P19447 782 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 GNAQP50148 359 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 FOSBP53539 338 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 SP3Q02447 781 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 GPKOWQ92917 476 aaPredicted RBP eCLIP13.14□□□□□ -0.31
HTT-213ENST00000513806 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 MTMR8Q96EF0 704 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 TRIM47Q96LD4 638 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 SPZ1Q9BXG8 430 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
HTT-213ENST00000513806 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
HTT-213ENST00000513806 ZBTB5O15062 677 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 FKTNO75072 461 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 ICAM1P05362 532 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 PSMC4P43686 418 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 RCAN1P53805 252 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 LACTBP83111 547 aaPredicted RBP13.13□□□□□ -0.31
HTT-213ENST00000513806 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 RIOX2Q8IUF8 465 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 MB21D1Q8N884 522 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 RRP36Q96EU6 259 aaKnown RBP13.13□□□□□ -0.31
HTT-213ENST00000513806 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
HTT-213ENST00000513806 PNMA6FA0A0J9YX94 578 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 NFIBO00712 420 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 CPLX1O14810 134 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 ADAMTS3O15072 1205 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
HTT-213ENST00000513806 PKN1Q16512 942 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
HTT-213ENST00000513806 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
HTT-213ENST00000513806 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
HTT-213ENST00000513806 LZTS2Q9BRK4 669 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 TEX13BQ9BXU2 312 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 GABRQQ9UN88 632 aa13.12□□□□□ -0.31
HTT-213ENST00000513806 IFNAR1P17181 557 aa13.11□□□□□ -0.31
HTT-213ENST00000513806 CTCFP49711 727 aaPredicted RBP13.11□□□□□ -0.31
HTT-213ENST00000513806 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
HTT-213ENST00000513806 WWC2Q6AWC2 1192 aa13.11□□□□□ -0.31
HTT-213ENST00000513806 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
HTT-213ENST00000513806 GPR142Q7Z601 462 aa13.11□□□□□ -0.31
HTT-213ENST00000513806 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
HTT-213ENST00000513806 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms