RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 TMEM31Q5JXX7 168 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 PPP2R2DQ66LE6 453 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 MAMDC4Q6UXC1 1216 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 CLEC10AQ8IUN9 316 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 ANTXR1Q9H6X2 564 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 SPC25Q9HBM1 224 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 FBXO28Q9NVF7 368 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 MCM9Q9NXL9 1143 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 TLR7Q9NYK1 1049 aaKnown RBP10.89□□□□□ -0.67
CAST-239ENST00000513666 SWAP70Q9UH65 585 aa10.89□□□□□ -0.67
CAST-239ENST00000513666 MUC6Q6W4X9 2439 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 MAGEB6P1A0A0J9YX57 407 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 ADCY6O43306 1168 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 RARSP54136 660 aaKnown RBP10.88□□□□□ -0.67
CAST-239ENST00000513666 GJA9P57773 515 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 CRNKL1Q9BZJ0 848 aaKnown RBP10.88□□□□□ -0.67
CAST-239ENST00000513666 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 PCDHA11Q9Y5I1 949 aa10.88□□□□□ -0.67
CAST-239ENST00000513666 PRRC2BQ5JSZ5 2229 aaKnown RBP10.88□□□□□ -0.67
CAST-239ENST00000513666 XIRP2A4UGR9 3374 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 LRRC37A2A6NM11 1700 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 DNAJC25-GNG10A0A024R161 153 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 GPR37L1O60883 481 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 CYP2D6P10635 497 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 AKR1B1P15121 316 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 POU3F3P20264 500 aaPredicted RBP10.87□□□□□ -0.67
CAST-239ENST00000513666 RABGGTBP53611 331 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 SKIV2LQ15477 1246 aaKnown RBP10.87□□□□□ -0.67
CAST-239ENST00000513666 GNASQ5JWF2 1037 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 OTOP2Q7RTS6 562 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 SSH3Q8TE77 659 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 CCDC8Q9H0W5 538 aaPredicted RBP10.87□□□□□ -0.67
CAST-239ENST00000513666 HIPK3Q9H422 1215 aa10.87□□□□□ -0.67
CAST-239ENST00000513666 MCM3APO60318 1980 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 UMODL1Q5DID0 1318 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 SURF6O75683 361 aaKnown RBP10.86□□□□□ -0.67
CAST-239ENST00000513666 MYOGP15173 224 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 NKX3-2P78367 333 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 ACVR2BQ13705 512 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 CCDC144BQ3MJ40 725 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 SLC43A3Q8NBI5 491 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 EAF2Q96CJ1 260 aaPredicted RBP10.86□□□□□ -0.67
CAST-239ENST00000513666 DDX11Q96FC9 970 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 DYNLL2Q96FJ2 89 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 DCP1AQ9NPI6 582 aaPredicted RBP10.86□□□□□ -0.67
CAST-239ENST00000513666 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.86□□□□□ -0.67
CAST-239ENST00000513666 COG5Q9UP83 839 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 MTCH2Q9Y6C9 303 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 SLC4A7Q9Y6M7 1214 aa10.86□□□□□ -0.67
CAST-239ENST00000513666 CTAGE5O15320 804 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
CAST-239ENST00000513666 TLL1O43897 1013 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 EEF2P13639 858 aaKnown RBP10.85□□□□□ -0.67
CAST-239ENST00000513666 TRIM27P14373 513 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 ATP8B2P98198 1209 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 SNRNP48Q6IEG0 339 aaKnown RBP10.85□□□□□ -0.67
CAST-239ENST00000513666 SDR42E1Q8WUS8 393 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 TEX13BQ9BXU2 312 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 ABHD16BQ9H3Z7 469 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
CAST-239ENST00000513666 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
CAST-239ENST00000513666 PDE6AP16499 860 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 CCL23P55773 120 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 FAM83BQ5T0W9 1011 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAST-239ENST00000513666 RPUSD2Q8IZ73 545 aaKnown RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 RIPK3Q9Y572 518 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 RFXAPO00287 272 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 IPO8O15397 1037 aaKnown RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 BCAR3O75815 825 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 CABYRO75952 493 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 ATP2A2P16615 1042 aaKnown RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 SLC9C2Q5TAH2 1124 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 ALYREFQ86V81 257 aaKnown RBP10.84□□□□□ -0.67
CAST-239ENST00000513666 LCORLQ8N3X6 602 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
CAST-239ENST00000513666 VWCEQ96DN2 955 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 FGD4Q96M96 766 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 KANSL2Q9H9L4 492 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 TNNQ9UQP3 1299 aa10.84□□□□□ -0.67
CAST-239ENST00000513666 BAZ2AQ9UIF9 1905 aaKnown RBP10.83□□□□□ -0.68
CAST-239ENST00000513666 ZNF532Q9HCE3 1301 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 FAM86C2PA6NEL3 165 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 ZBBXA8MT70 800 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 ATP2A1O14983 1001 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 CA3P07451 260 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 CDK8P49336 464 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 BEX3Q00994 111 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 ITGA7Q13683 1181 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 TMEM67Q5HYA8 995 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 ARMCX2Q7L311 632 aa10.83□□□□□ -0.68
CAST-239ENST00000513666 HLA-CQ95604 372 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms