RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 MYH6P13533 1939 aa11.68□□□□□ -0.54
CCL28-203ENST00000513525 LCTP09848 1927 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 F5H6K3 240 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 STK25O00506 426 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 FOXP2O15409 715 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 COBLO75128 1261 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 SLC3A2P08195 630 aaKnown RBP11.67□□□□□ -0.54
CCL28-203ENST00000513525 FCER1AP12319 257 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 CYP2C19P33261 490 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 COPB2P35606 906 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 PDE4BQ07343 736 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 KLRC3Q07444 240 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 PPARAQ07869 468 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 CEP95Q96GE4 821 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 MTMR4Q9NYA4 1195 aa11.67□□□□□ -0.54
CCL28-203ENST00000513525 RBM27Q9P2N5 1060 aaKnown RBP11.67□□□□□ -0.54
CCL28-203ENST00000513525 A0A1W2PPC1 479 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 PRDM1O75626 825 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 TTLL1O95922 423 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 NDUFB10O96000 172 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 STAT3P40763 770 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 NEDD1Q8NHV4 660 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 TBC1D32Q96NH3 1257 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 SLF1Q9BQI6 1058 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 CLIP2Q9UDT6 1046 aa11.66□□□□□ -0.54
CCL28-203ENST00000513525 LRRC37A2A6NM11 1700 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 ATP2A1O14983 1001 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 HRO43593 1189 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 RAD21O60216 631 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 TSPY3P0CV98 308 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 TSPY8P0CW00 308 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 PLEKHM2Q8IWE5 1019 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 PRPF38AQ8NAV1 312 aaKnown RBP11.65□□□□□ -0.54
CCL28-203ENST00000513525 GMCL1P1Q8NEA9 526 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 MAML3Q96JK9 1138 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 NUP88Q99567 741 aaPredicted RBP11.65□□□□□ -0.54
CCL28-203ENST00000513525 HELLSQ9NRZ9 838 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 ANAPC4Q9UJX5 808 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 DIS3Q9Y2L1 958 aaKnown RBP11.65□□□□□ -0.54
CCL28-203ENST00000513525 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCL28-203ENST00000513525 ZMYM6O95789 1325 aa11.65□□□□□ -0.54
CCL28-203ENST00000513525 SEPT4O43236 478 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 CNGA1P29973 690 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 ALX1Q15699 326 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 PPP4R3BQ5MIZ7 849 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 CCDC129Q6ZRS4 1044 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.55
CCL28-203ENST00000513525 C7orf61Q8IZ16 206 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 KCTD12Q96CX2 325 aaKnown RBP11.65□□□□□ -0.55
CCL28-203ENST00000513525 MMP19Q99542 508 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.55
CCL28-203ENST00000513525 NRBP1Q9UHY1 535 aa11.65□□□□□ -0.55
CCL28-203ENST00000513525 DNM1LO00429 736 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 RGS20O76081 388 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 BMP8BP34820 402 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 TFAP4Q01664 338 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 KCTD2Q14681 263 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 ZNF792Q3KQV3 632 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 GDF15Q99988 308 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
CCL28-203ENST00000513525 FGRP09769 529 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 FDX1P10109 184 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 OAZ1P54368 228 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 LRRC26Q2I0M4 334 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 FAM47AQ5JRC9 791 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 TTC22Q5TAA0 569 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 VPS53Q5VIR6 699 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 SNRNP48Q6IEG0 339 aaKnown RBP11.63□□□□□ -0.55
CCL28-203ENST00000513525 LRRC47Q8N1G4 583 aaKnown RBP11.63□□□□□ -0.55
CCL28-203ENST00000513525 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 TINF2Q9BSI4 451 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 OSBPL3Q9H4L5 887 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 SLC38A10Q9HBR0 1119 aa11.63□□□□□ -0.55
CCL28-203ENST00000513525 A0A0D9SFI3 127 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 TSPY2A6NKD2 308 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 ORC4O43929 436 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 PLA2G6O60733 806 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 ZBED4O75132 1171 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 CDC45O75419 566 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 BMP3P12645 472 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 NOVP48745 357 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 CTDSPL2Q05D32 466 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 BECN1Q14457 450 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 MSL3Q8N5Y2 521 aaKnown RBP11.62□□□□□ -0.55
CCL28-203ENST00000513525 ARRDC4Q8NCT1 418 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 FAM227BQ96M60 508 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 ZMYND8Q9ULU4 1186 aaPredicted RBP11.62□□□□□ -0.55
CCL28-203ENST00000513525 RIPK3Q9Y572 518 aa11.62□□□□□ -0.55
CCL28-203ENST00000513525 DNAJC25-GNG10A0A024R161 153 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 PGK2P07205 417 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 STAT2P52630 851 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 C22orf23Q9BZE7 217 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 SENP6Q9GZR1 1112 aaPredicted RBP11.61□□□□□ -0.55
CCL28-203ENST00000513525 IL17RBQ9NRM6 502 aa11.61□□□□□ -0.55
CCL28-203ENST00000513525 FBXO40Q9UH90 709 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms