RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
PTPN20-227ENST00000513159 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
PTPN20-227ENST00000513159 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
PTPN20-227ENST00000513159 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
PTPN20-227ENST00000513159 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 GOLGA8BA8MQT2 603 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 FKTNO75072 461 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CALM1P0DP23 149 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CALM2P0DP24 149 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CALM3P0DP25 149 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 FGD1P98174 961 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 RABEP1Q15276 862 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 RTN1Q16799 776 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 QRICH1Q2TAL8 776 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 GTF3C2Q8WUA4 911 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 PIGSQ96S52 555 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
PTPN20-227ENST00000513159 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 HTTP42858 3142 aa12.04□□□□□ -0.48
PTPN20-227ENST00000513159 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 PFKFB2O60825 505 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 ERCC3P19447 782 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 STAT3P40763 770 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN20-227ENST00000513159 SCRN1Q12765 414 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 IKQ13123 557 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-227ENST00000513159 STK3Q13188 491 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-227ENST00000513159 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
PTPN20-227ENST00000513159 OPLAHO14841 1288 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 ZBED4O75132 1171 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 ICAM1P05362 532 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 FDX1P10109 184 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 KIF5BP33176 963 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 PSMC4P43686 418 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 OAZ1P54368 228 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 PLS1Q14651 629 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.49
PTPN20-227ENST00000513159 CLEC4DQ8WXI8 215 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 USP6NLQ92738 828 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-227ENST00000513159 GABRQQ9UN88 632 aa12.02□□□□□ -0.49
PTPN20-227ENST00000513159 PKN1Q16512 942 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 SYNE3Q6ZMZ3 975 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPN20-227ENST00000513159 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 PHKBQ93100 1093 aa12.01□□□□□ -0.49
PTPN20-227ENST00000513159 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
PTPN20-227ENST00000513159 PNMA6FA0A0J9YX94 578 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 NFIBO00712 420 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 ZBTB5O15062 677 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 ALAS1P13196 640 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 IFNAR1P17181 557 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 GNAQP50148 359 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 ANKRD1Q15327 319 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 MORN1Q5T089 497 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 GTF3C6Q969F1 213 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 COA7Q96BR5 231 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 LIMCH1Q9UPQ0 1083 aa12□□□□□ -0.49
PTPN20-227ENST00000513159 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
PTPN20-227ENST00000513159 KIAA0100Q14667 2235 aaKnown RBP12□□□□□ -0.49
PTPN20-227ENST00000513159 ADAMTS3O15072 1205 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 DHX16O60231 1041 aaKnown RBP11.99□□□□□ -0.49
PTPN20-227ENST00000513159 COBLO75128 1261 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 SLC25A27O95847 323 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 IGHA2P01877 340 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
PTPN20-227ENST00000513159 PTPREP23469 700 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 MAPK4P31152 587 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 GRB14Q14449 540 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 USH1GQ495M9 461 aa11.99□□□□□ -0.49
PTPN20-227ENST00000513159 NCAPG2Q86XI2 1143 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms