RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 APBB1O00213 710 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 GOLIM4O00461 696 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 ADCY6O43306 1168 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 BMP1P13497 986 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 AAK1Q2M2I8 961 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 SNRNP48Q6IEG0 339 aaKnown RBP16.73■□□□□ 0.27
SPCS3-204ENST00000513139 PRPF38AQ8NAV1 312 aaKnown RBP16.73■□□□□ 0.27
SPCS3-204ENST00000513139 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 NKX2-4Q9H2Z4 354 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.73■□□□□ 0.27
SPCS3-204ENST00000513139 RIPK3Q9Y572 518 aa16.73■□□□□ 0.27
SPCS3-204ENST00000513139 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 USP17L21D6R901 530 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 PRKAB2O43741 272 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 CYP2C18P33260 490 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 IRX5P78411 483 aaPredicted RBP16.72■□□□□ 0.27
SPCS3-204ENST00000513139 CEP85Q6P2H3 762 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 SLC43A3Q8NBI5 491 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 EXOC6BQ9Y2D4 811 aa16.72■□□□□ 0.27
SPCS3-204ENST00000513139 YBX2Q9Y2T7 364 aaKnown RBP16.72■□□□□ 0.27
SPCS3-204ENST00000513139 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 PIEZO1Q92508 2521 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 CYP2D7A0A087X1C5 515 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 CTAGE5O15320 804 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 CABYRO75952 493 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 MBD4O95243 580 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 ADD2P35612 726 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
SPCS3-204ENST00000513139 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 DNAJC2Q99543 621 aaKnown RBP16.71■□□□□ 0.27
SPCS3-204ENST00000513139 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 FBXO40Q9UH90 709 aa16.71■□□□□ 0.27
SPCS3-204ENST00000513139 SMIM22K7EJ46 135 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 RAD21O60216 631 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 ARMCX2Q7L311 632 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 CLASRPQ8N2M8 674 aaKnown RBP16.7■□□□□ 0.26
SPCS3-204ENST00000513139 FGD4Q96M96 766 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPCS3-204ENST00000513139 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPCS3-204ENST00000513139 IL1RAPL2Q9NP60 686 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 PCDHA11Q9Y5I1 949 aa16.7■□□□□ 0.26
SPCS3-204ENST00000513139 ZBED4O75132 1171 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 POU3F3P20264 500 aaPredicted RBP16.69■□□□□ 0.26
SPCS3-204ENST00000513139 PPP2R2DQ66LE6 453 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 OTOP2Q7RTS6 562 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 IFNLR1Q8IU57 520 aaPredicted RBP16.69■□□□□ 0.26
SPCS3-204ENST00000513139 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
SPCS3-204ENST00000513139 ANKRD35Q8N283 1001 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 KATNBL1Q9H079 304 aa16.69■□□□□ 0.26
SPCS3-204ENST00000513139 F5H6K3 240 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 ERC2O15083 957 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 OAZ1P54368 228 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 KLRC3Q07444 240 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 CTR9Q6PD62 1173 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 CPXCR1Q8N123 301 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 NECAB3Q96P71 396 aaPredicted RBP16.68■□□□□ 0.26
SPCS3-204ENST00000513139 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
SPCS3-204ENST00000513139 SLC38A10Q9HBR0 1119 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 CTDP1Q9Y5B0 961 aaPredicted RBP16.68■□□□□ 0.26
SPCS3-204ENST00000513139 SLC4A7Q9Y6M7 1214 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
SPCS3-204ENST00000513139 LRRC37A2A6NM11 1700 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 NDUFB10O96000 172 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 IFIT2P09913 472 aaKnown RBP16.67■□□□□ 0.26
SPCS3-204ENST00000513139 TNFAIP2Q03169 654 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 UBE3CQ15386 1083 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 CXCL17Q6UXB2 119 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 KIF1BPQ96EK5 621 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
SPCS3-204ENST00000513139 ARPP21Q9UBL0 812 aaPredicted RBP16.67■□□□□ 0.26
SPCS3-204ENST00000513139 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
SPCS3-204ENST00000513139 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
SPCS3-204ENST00000513139 FDX1P10109 184 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 RLBP1P12271 317 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 BEX3Q00994 111 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 TFF2Q03403 129 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
SPCS3-204ENST00000513139 FEM1BQ9UK73 627 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 SYNPO2Q9UMS6 1093 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 GNEQ9Y223 722 aaKnown RBP16.66■□□□□ 0.26
SPCS3-204ENST00000513139 HCN4Q9Y3Q4 1203 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 MUC6Q6W4X9 2439 aa16.66■□□□□ 0.26
SPCS3-204ENST00000513139 ZEB2O60315 1214 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 PFKMP08237 780 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 ATP2A2P16615 1042 aaKnown RBP16.65■□□□□ 0.26
SPCS3-204ENST00000513139 ATP5JP18859 108 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 RASA1P20936 1047 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 RABGGTBP53611 331 aa16.65■□□□□ 0.26
SPCS3-204ENST00000513139 CCL23P55773 120 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms