RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 SYNE3Q6ZMZ3 975 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 SHCBP1Q8NEM2 672 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 CTCFLQ8NI51 663 aaPredicted RBP20.28■□□□□ 0.84
DDR1-270ENST00000513043 RAET1EQ8TD07 263 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 TM6SF1Q9BZW5 370 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 MROH8Q9H579 483 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 ATP2A1O14983 1001 aa20.27■□□□□ 0.84
DDR1-270ENST00000513043 ALAS1P13196 640 aa20.27■□□□□ 0.84
DDR1-270ENST00000513043 GJD2Q9UKL4 321 aa20.27■□□□□ 0.84
DDR1-270ENST00000513043 CCPG1Q9ULG6 757 aa20.27■□□□□ 0.84
DDR1-270ENST00000513043 DOCK3Q8IZD9 2030 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 CALM1P0DP23 149 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 CALM2P0DP24 149 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 CALM3P0DP25 149 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 CYP2B6P20813 491 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 PTPREP23469 700 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 KIF5BP33176 963 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 OAZ1P54368 228 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 SLC35G1Q2M3R5 365 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 NBPF11Q86T75 865 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 CMTR1Q8N1G2 835 aaKnown RBP20.26■□□□□ 0.83
DDR1-270ENST00000513043 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 NUDT12Q9BQG2 462 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 LARP6Q9BRS8 491 aaKnown RBP20.26■□□□□ 0.83
DDR1-270ENST00000513043 JMJD4Q9H9V9 463 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 PDRG1Q9NUG6 133 aa20.26■□□□□ 0.83
DDR1-270ENST00000513043 ZBTB43O43298 467 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 PLEKHA8P1O95397 391 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 ICAM1P05362 532 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 PRMT2P55345 433 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 CDC37Q16543 378 aaPredicted RBP20.25■□□□□ 0.83
DDR1-270ENST00000513043 MORN1Q5T089 497 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 HOMER1Q86YM7 354 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 SOCS4Q8WXH5 440 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 MAP3K14Q99558 947 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 C22orf23Q9BZE7 217 aa20.25■□□□□ 0.83
DDR1-270ENST00000513043 SLC15A5A6NIM6 579 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 CCDC85CA6NKD9 419 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 GOLGA8AA7E2F4 631 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 GOLGA8BA8MQT2 603 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 FCER1AP12319 257 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 ELNP15502 786 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 ADORA2AP29274 412 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 COPB2P35606 906 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 TOB2Q14106 344 aaPredicted RBP20.24■□□□□ 0.83
DDR1-270ENST00000513043 GRB14Q14449 540 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 QRICH1Q2TAL8 776 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 USH1GQ495M9 461 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 TRERF1Q96PN7 1200 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 MMP19Q99542 508 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 RNF146Q9NTX7 359 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 HPS5Q9UPZ3 1129 aa20.24■□□□□ 0.83
DDR1-270ENST00000513043 CYTH3O43739 400 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 ADCY3O60266 1144 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 MAP2K5Q13163 448 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 MUM1L1Q5H9M0 696 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 CCDC82Q8N4S0 544 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 SH3TC2Q8TF17 1288 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 USP6NLQ92738 828 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 AGXT2Q9BYV1 514 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 UPF2Q9HAU5 1272 aaKnown RBP20.23■□□□□ 0.83
DDR1-270ENST00000513043 PLXNB2O15031 1838 aa20.23■□□□□ 0.83
DDR1-270ENST00000513043 STRNO43815 780 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 PGK2P07205 417 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 RGS2P41220 211 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 KCTD2Q14681 263 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 RTN1Q16799 776 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 SLC9C1Q4G0N8 1177 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 DPP9Q86TI2 863 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 FBXL16Q8N461 479 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 SRBD1Q8N5C6 995 aaKnown RBP20.22■□□□□ 0.83
DDR1-270ENST00000513043 CHST13Q8NET6 341 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 PIGSQ96S52 555 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 RIOX1Q9H6W3 641 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 ACAD9Q9H845 621 aa20.22■□□□□ 0.83
DDR1-270ENST00000513043 COBLO75128 1261 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 MYCP01106 439 aaPredicted RBP20.21■□□□□ 0.83
DDR1-270ENST00000513043 GRK4P32298 578 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 GNAQP50148 359 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 METAP2P50579 478 aaKnown RBP eCLIP20.21■□□□□ 0.83
DDR1-270ENST00000513043 IRF5Q13568 498 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 CCL14Q16627 93 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 TKFCQ3LXA3 575 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 TMTC3Q6ZXV5 915 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
DDR1-270ENST00000513043 IL17RAQ96F46 866 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 BIN2Q9UBW5 565 aaPredicted RBP20.21■□□□□ 0.83
DDR1-270ENST00000513043 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
DDR1-270ENST00000513043 hCG_1642624A0A1W2PR95 340 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 CDC27P30260 824 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 NEK4P51957 841 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 FBXO11Q86XK2 927 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 ABRAQ8N0Z2 381 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 ANKRD35Q8N283 1001 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 NPLOC4Q8TAT6 608 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 MTMR8Q96EF0 704 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 DDX11Q96FC9 970 aa20.2■□□□□ 0.82
DDR1-270ENST00000513043 APBA2Q99767 749 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms