RNA–Protein interactions for RNA: ENST00000513013.5

SUB1-212, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 5

Gene SUB1, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-212ENST00000513013 PCGF6Q9BYE7 350 aa4.86□□□□□ -1.63
SUB1-212ENST00000513013 ATP13A1Q9HD20 1204 aa4.86□□□□□ -1.63
SUB1-212ENST00000513013 SEMA3GQ9NS98 782 aa4.86□□□□□ -1.63
SUB1-212ENST00000513013 ZNF214Q9UL59 606 aaPredicted RBP4.86□□□□□ -1.63
SUB1-212ENST00000513013 H3BS24 57 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 PARNO95453 639 aaKnown RBP4.85□□□□□ -1.63
SUB1-212ENST00000513013 PGRP06401 933 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 TMEM253P0C7T8 217 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 RAG1P15918 1043 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 SOX5P35711 763 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 STAT3P40763 770 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 YARSP54577 528 aaKnown RBP4.85□□□□□ -1.63
SUB1-212ENST00000513013 SLBPQ14493 270 aaKnown RBP eCLIP4.85□□□□□ -1.63
SUB1-212ENST00000513013 FNDC3BQ53EP0 1204 aaKnown RBP4.85□□□□□ -1.63
SUB1-212ENST00000513013 FYB2Q5VWT5 728 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 KIAA1211LQ6NV74 962 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 LETMD1Q6P1Q0 360 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 TMPRSS7Q7RTY8 843 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 NIM1KQ8IY84 436 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 LRRC56Q8IYG6 542 aaPredicted RBP4.85□□□□□ -1.63
SUB1-212ENST00000513013 SLFN12Q8IYM2 578 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 PIWIL2Q8TC59 973 aaKnown RBP4.85□□□□□ -1.63
SUB1-212ENST00000513013 KLHL6Q8WZ60 621 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 CEP89Q96ST8 783 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 CAAP1Q9H8G2 361 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 CAPN6Q9Y6Q1 641 aa4.85□□□□□ -1.63
SUB1-212ENST00000513013 PLD2O14939 933 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 KCNQ2O43526 872 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 DNAJA2O60884 412 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 CFPP27918 469 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 PMLP29590 882 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 GRK4P32298 578 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 ETV3P41162 512 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 PMS1P54277 932 aaKnown RBP4.84□□□□□ -1.63
SUB1-212ENST00000513013 GNPTABQ3T906 1256 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 PRR23BQ6ZRT6 265 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 UBE3DQ7Z6J8 389 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 FERMT3Q86UX7 667 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 PRPF38AQ8NAV1 312 aaKnown RBP4.84□□□□□ -1.63
SUB1-212ENST00000513013 ABHD4Q8TB40 342 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 SMARCC1Q92922 1105 aaPredicted RBP4.84□□□□□ -1.63
SUB1-212ENST00000513013 KIF2CQ99661 725 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 HOMER2Q9NSB8 354 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 CHPF2Q9P2E5 772 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 KLHL3Q9UH77 587 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 ATP8A1Q9Y2Q0 1164 aa4.84□□□□□ -1.63
SUB1-212ENST00000513013 ANKRD34BA5PLL1 514 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 ALG1L2C9J202 215 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 RGS13O14921 159 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 CST3P01034 146 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 MYCLP1P12525 358 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 CNGA1P29973 690 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 PABPC4Q13310 644 aaKnown RBP eCLIP4.83□□□□□ -1.64
SUB1-212ENST00000513013 SLC6A19Q695T7 634 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 THNSL2Q86YJ6 484 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 MCATQ8IVS2 390 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 MRPL41Q8IXM3 137 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 FAM13CQ8NE31 585 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 KISS1RQ969F8 398 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 UBE2FQ969M7 185 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 SYTL4Q96C24 671 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 ACSF2Q96CM8 615 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 IPO9Q96P70 1041 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 MRPL4Q9BYD3 311 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 EPB41L4BQ9H329 900 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 TRIT1Q9H3H1 467 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 NSUN3Q9H649 340 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 NCOA5Q9HCD5 579 aaKnown RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 DCP1AQ9NPI6 582 aaPredicted RBP4.83□□□□□ -1.64
SUB1-212ENST00000513013 RAPGEFL1Q9UHV5 662 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 MCM8Q9UJA3 840 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 MAPRE3Q9UPY8 281 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 ST14Q9Y5Y6 855 aa4.83□□□□□ -1.64
SUB1-212ENST00000513013 A0A087X0B3 334 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 TRAV20A0A0B4J274 112 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 PRR33A8MZF0 331 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 CHURC1-FNTBB4DL54 471 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 CBX7O95931 251 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 ZSCAN22P10073 491 aaPredicted RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 EXOSC10Q01780 885 aaKnown RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 HSP90AA2PQ14568 343 aaPredicted RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 CT47A1Q5JQC4 288 aaPredicted RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 ODR4Q5SWX8 454 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 DHX37Q8IY37 1157 aaKnown RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 MYLIPQ8WY64 445 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 DIRC2Q96SL1 478 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 CDC6Q99741 560 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 APBA2Q99767 749 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 POLR3GLQ9BT43 218 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 AARSD1Q9BTE6 412 aaKnown RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 DHRS4Q9BTZ2 278 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 FBRSQ9HAH7 460 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 INTS7Q9NVH2 962 aaKnown RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 SLAMF8Q9P0V8 285 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 ZSWIM5Q9P217 1185 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 SUCOQ9UBS9 1254 aaKnown RBP4.82□□□□□ -1.64
SUB1-212ENST00000513013 PCDHB10Q9UN67 800 aa4.82□□□□□ -1.64
SUB1-212ENST00000513013 FAN1Q9Y2M0 1017 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms