RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
CDK7-208ENST00000512687 GJC2Q5T442 439 aaPredicted RBP14.21□□□□□ -0.13
CDK7-208ENST00000512687 STAG1Q8WVM7 1258 aa14.21□□□□□ -0.13
CDK7-208ENST00000512687 FAM212AQ96EL1 285 aa14.21□□□□□ -0.13
CDK7-208ENST00000512687 TINF2Q9BSI4 451 aa14.21□□□□□ -0.13
CDK7-208ENST00000512687 DIAPH3Q9NSV4 1193 aa14.21□□□□□ -0.13
CDK7-208ENST00000512687 DIS3Q9Y2L1 958 aaKnown RBP14.21□□□□□ -0.13
CDK7-208ENST00000512687 SYN1P17600 705 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 OAZ1P54368 228 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
CDK7-208ENST00000512687 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
CDK7-208ENST00000512687 PPP4R3BQ5MIZ7 849 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 TTC22Q5TAA0 569 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 RCSD1Q6JBY9 416 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 FAM160B2Q86V87 743 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 LENG1Q96BZ8 264 aaPredicted RBP14.2□□□□□ -0.14
CDK7-208ENST00000512687 AGBL1Q96MI9 1066 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 TMEM47Q9BQJ4 181 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 HOMER2Q9NSB8 354 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 TCP11L1Q9NUJ3 509 aa14.2□□□□□ -0.14
CDK7-208ENST00000512687 CTDP1Q9Y5B0 961 aaPredicted RBP14.2□□□□□ -0.14
CDK7-208ENST00000512687 DNM1LO00429 736 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 PLA2G6O60733 806 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 ZNF865P0CJ78 1059 aaPredicted RBP14.19□□□□□ -0.14
CDK7-208ENST00000512687 CCDC96Q2M329 555 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 TTBK2Q6IQ55 1244 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 CCDC174Q6PII3 467 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 CHURC1Q8WUH1 139 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 DCAF4Q8WV16 495 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 SENP6Q9GZR1 1112 aaPredicted RBP14.19□□□□□ -0.14
CDK7-208ENST00000512687 PRR12Q9ULL5 1215 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 LAMA3Q16787 3333 aa14.19□□□□□ -0.14
CDK7-208ENST00000512687 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
CDK7-208ENST00000512687 HIP1O00291 1037 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
CDK7-208ENST00000512687 TOP1P11387 765 aaKnown RBP14.18□□□□□ -0.14
CDK7-208ENST00000512687 SLC16A2P36021 539 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 ATN1P54259 1190 aaPredicted RBP14.18□□□□□ -0.14
CDK7-208ENST00000512687 LRRC41Q15345 812 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 MFSD6Q6ZSS7 791 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 CHST13Q8NET6 341 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 DDX11Q96FC9 970 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 ZKSCAN3Q9BRR0 538 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 DSCC1Q9BVC3 393 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 RNF146Q9NTX7 359 aa14.18□□□□□ -0.14
CDK7-208ENST00000512687 ASTN1O14525 1302 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 SYNGAP1Q96PV0 1343 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 KIAA1217Q5T5P2 1943 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 ZNF213O14771 459 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 ADCY6O43306 1168 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 FDX1P10109 184 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 PDHBP11177 359 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 PCP11498 1178 aaKnown RBP14.17□□□□□ -0.14
CDK7-208ENST00000512687 CNTN2Q02246 1040 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 MUM1L1Q5H9M0 696 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 MAMDC4Q6UXC1 1216 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 BTNL9Q6UXG8 535 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 ANKRD35Q8N283 1001 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 GDF15Q99988 308 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
CDK7-208ENST00000512687 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 A1CFQ9NQ94 594 aaKnown RBP14.17□□□□□ -0.14
CDK7-208ENST00000512687 FBXO40Q9UH90 709 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 NRBP1Q9UHY1 535 aa14.17□□□□□ -0.14
CDK7-208ENST00000512687 B4E1Z4 1266 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 KBTBD13C9JR72 458 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 PGK1P00558 417 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 ALAS1P13196 640 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 SYDE2Q5VT97 1194 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 ZNF467Q7Z7K2 595 aaPredicted RBP14.16□□□□□ -0.14
CDK7-208ENST00000512687 MSL3Q8N5Y2 521 aaKnown RBP14.16□□□□□ -0.14
CDK7-208ENST00000512687 FAM133AQ8N9E0 248 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 ARRDC4Q8NCT1 418 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 TRERF1Q96PN7 1200 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
CDK7-208ENST00000512687 GPCPD1Q9NPB8 672 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
CDK7-208ENST00000512687 DDX49Q9Y6V7 483 aaKnown RBP14.16□□□□□ -0.14
CDK7-208ENST00000512687 BAZ2BQ9UIF8 2168 aaKnown RBP14.16□□□□□ -0.14
CDK7-208ENST00000512687 SOWAHBA6NEL2 793 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 KDM4AO75164 1064 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 SNHG28P0DPA3 235 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 RARBP10826 455 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 AKR1A1P14550 325 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 MAGEA10P43363 369 aaPredicted RBP14.15□□□□□ -0.14
CDK7-208ENST00000512687 RTP1P59025 263 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 IRX5P78411 483 aaPredicted RBP14.15□□□□□ -0.14
CDK7-208ENST00000512687 TKFCQ3LXA3 575 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 ESR2Q92731 530 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 KATNBL1Q9H079 304 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.15□□□□□ -0.14
CDK7-208ENST00000512687 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
CDK7-208ENST00000512687 CCPG1Q9ULG6 757 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 CNPY2Q9Y2B0 182 aa14.15□□□□□ -0.14
CDK7-208ENST00000512687 SYNRGQ9UMZ2 1314 aa14.15□□□□□ -0.15
CDK7-208ENST00000512687 MYADML2A6NDP7 307 aa14.14□□□□□ -0.15
CDK7-208ENST00000512687 SOX1O00570 391 aaPredicted RBP14.14□□□□□ -0.15
CDK7-208ENST00000512687 ADAMTS4O75173 837 aa14.14□□□□□ -0.15
CDK7-208ENST00000512687 ICAM1P05362 532 aa14.14□□□□□ -0.15
CDK7-208ENST00000512687 CHMLP26374 656 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms