RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 BRD9Q9H8M2 597 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 HERC5Q9UII4 1024 aaKnown RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 FOXN3O00409 490 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 CPLX1O14810 134 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 RFPL3O75679 317 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 ABCB4P21439 1286 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 MCM4P33991 863 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 KRT83P78385 493 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLC27A3Q5K4L6 730 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 DAAM2Q86T65 1068 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 MYLK4Q86YV6 388 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 FAM178BQ8IXR5 827 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 ST13P5Q8NFI4 369 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 ADAMTS18Q8TE60 1221 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 RSAD2Q8WXG1 361 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 DDX1Q92499 740 aaKnown RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 RBM18Q96H35 190 aaKnown RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 NGLY1Q96IV0 654 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 FERD3LQ96RJ6 166 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 KIF2CQ99661 725 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 UNKQ9C0B0 810 aaKnown RBP7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 PTPN22Q9Y2R2 807 aa7.24□□□□□ -1.25
TRAPPC11-209ENST00000512476 FSD2A1L4K1 749 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 COQ9O75208 318 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 POLBP06746 335 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 PARP1P09874 1014 aaKnown RBP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 PAX7P23759 505 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 TMF1P82094 1093 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 VWA3BQ502W6 1294 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 BLOC1S3Q6QNY0 202 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 FAM156AQ8NDB6 213 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 AFAP1L1Q8TED9 768 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 TTC17Q96AE7 1141 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 ANTXR1Q9H6X2 564 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 KCTD5Q9NXV2 234 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 CABP1Q9NZU7 370 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 POLHQ9Y253 713 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 PARP3Q9Y6F1 533 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 PCF11O94913 1555 aaKnown RBP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 CYP11A1P05108 521 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 SMARCA1P28370 1054 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 CAMK2GQ13555 558 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 GK5Q6ZS86 529 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 FGD2Q7Z6J4 655 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 COL23A1Q86Y22 540 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 CMIPQ8IY22 773 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 ASB12Q8WXK4 309 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 TAAR9Q96RI9 348 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 MRPL9Q9BYD2 267 aaKnown RBP7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 ARHGAP28Q9P2N2 729 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 PCDHGB5Q9Y5G0 923 aa7.23□□□□□ -1.25
TRAPPC11-209ENST00000512476 TPPPO94811 219 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 LTFP02788 710 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 GRK6P43250 576 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 PLIN5Q00G26 463 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 GRB10Q13322 594 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 SMAD1Q15797 465 aaKnown RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 INF2Q27J81 1249 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 DZIP1LQ8IYY4 767 aaKnown RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 SPATA5Q8NB90 893 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 KCTD13Q8WZ19 329 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 ITFG2Q969R8 447 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 RMDN3Q96TC7 470 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 FANCFQ9NPI8 374 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 GPRC5BQ9NZH0 403 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 PCDHB10Q9UN67 800 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 FMN1Q68DA7 1419 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 EIF3FO00303 357 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 CELA3AP09093 270 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 KRT10P13645 584 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 KIF22Q14807 665 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 TLDC1Q6P9B6 456 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 CCDC149Q6ZUS6 474 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 ESX1Q8N693 406 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 LGR4Q9BXB1 951 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 EPB41L4AQ9HCS5 686 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 PPARGC1AQ9UBK2 798 aaKnown RBP7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 GPR34Q9UPC5 381 aa7.22□□□□□ -1.25
TRAPPC11-209ENST00000512476 MAGEB6P1A0A0J9YX57 407 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 STXBP3O00186 592 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 CHD1O14646 1710 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 SNUPNO95149 360 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 ATP6V1E1P36543 226 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 NPTX2P47972 431 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 PDE6CP51160 858 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 NEK4P51957 841 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 USP4Q13107 963 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 MAP3K1Q13233 1512 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRM2Q14416 872 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 MEA1Q16626 185 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 INAVAQ3KP66 663 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 IRGCQ6NXR0 463 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 EP400NLQ6ZTU2 488 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 IQCA1Q86XH1 822 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms