RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 SLC6A19Q695T7 634 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 IQCEQ6IPM2 695 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 SWSAP1Q6NVH7 229 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 CCDC129Q6ZRS4 1044 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 CPA6Q8N4T0 437 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 ANKRD24Q8TF21 1146 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 FMNL2Q96PY5 1086 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 ZFYVE28Q9HCC9 887 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 BRD7Q9NPI1 651 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 RASSF1Q9NS23 344 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 ANKEF1Q9NU02 776 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 TPCN1Q9ULQ1 816 aa7.36□□□□□ -1.23
CHD1-208ENST00000512392 A6NNZ2 444 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 UPK3BL1B0FP48 263 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 UPK3BL2E5RIL1 263 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 M0R3H8 397 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 TLR5O60602 858 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 GADD45BO75293 160 aaPredicted RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 ARIH2O95376 493 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 ZKSCAN1P17029 563 aaPredicted RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 GALNSP34059 522 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 GMPRP36959 345 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 IREB2P48200 963 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 ARSDP51689 593 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 PFKPQ01813 784 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 PPP2R5CQ13362 524 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 LONRF2Q1L5Z9 754 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 SLC10A6Q3KNW5 377 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 PLA2G4EQ3MJ16 856 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 FNDC3BQ53EP0 1204 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 FAM182BQ5T319 152 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 C11orf74Q86VG3 221 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 ZNF669Q96BR6 464 aaPredicted RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 PDLIM7Q9NR12 457 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 ANKRD6Q9Y2G4 727 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 MYBP10242 640 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 RAC2P15153 192 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 PCSK2P16519 638 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 IARSP41252 1262 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 ODF1Q14990 250 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 BNC2Q6ZN30 1099 aaPredicted RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 LSMEM1Q8N8F7 131 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 GLIS3Q8NEA6 775 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 SGCZQ96LD1 299 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 BARD1Q99728 777 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 MBIPQ9NS73 344 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 TRMT13Q9NUP7 481 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 CEP72Q9P209 647 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 NSFL1CQ9UNZ2 370 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 KCNH4Q9UQ05 1017 aa7.35□□□□□ -1.23
CHD1-208ENST00000512392 LRRFIP2Q9Y608 721 aaKnown RBP7.35□□□□□ -1.23
CHD1-208ENST00000512392 GOLGA6L6A8MZA4 724 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 FZD9O00144 591 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 DNAJC8O75937 253 aaPredicted RBP7.34□□□□□ -1.23
CHD1-208ENST00000512392 HNRNPCP07910 306 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHD1-208ENST00000512392 U2AF1L5P0DN76 240 aaPredicted RBP7.34□□□□□ -1.23
CHD1-208ENST00000512392 KCNA2P16389 499 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 MX2P20592 715 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 KRT20P35900 424 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 LIG3P49916 1009 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 U2AF1Q01081 240 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHD1-208ENST00000512392 PRKG2Q13237 762 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 PCBP2Q15366 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHD1-208ENST00000512392 SLC45A4Q5BKX6 768 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 FUBP3Q96I24 572 aaKnown RBP eCLIP7.34□□□□□ -1.23
CHD1-208ENST00000512392 C11orf16Q9NQ32 467 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 CRTAC1Q9NQ79 661 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 PNMA8BQ9ULN7 279 aaPredicted RBP7.34□□□□□ -1.23
CHD1-208ENST00000512392 MAFFQ9ULX9 164 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 DNM3Q9UQ16 869 aa7.34□□□□□ -1.23
CHD1-208ENST00000512392 CHL1O00533 1208 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 BRINP1O60477 761 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 PLOD3O60568 738 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 F13A1P00488 732 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 MYBL2P10244 700 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TFE3P19532 575 aaPredicted RBP7.33□□□□□ -1.24
CHD1-208ENST00000512392 HOXD12P35452 270 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 PEX19P40855 299 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CTBSQ01459 385 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 KRT76Q01546 638 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CLCQ05315 142 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 GTF2H3Q13889 308 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 DHCR24Q15392 516 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 PLBD1Q6P4A8 553 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 GK5Q6ZS86 529 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 SYDE1Q6ZW31 735 aaPredicted RBP7.33□□□□□ -1.24
CHD1-208ENST00000512392 LCA5Q86VQ0 697 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 ZFPM2Q8WW38 1151 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 A0A1W2PQH9 124 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TSPY2A6NKD2 308 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 CNOT4O95628 575 aaKnown RBP7.33□□□□□ -1.24
CHD1-208ENST00000512392 CPP00450 1065 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TSPY3P0CV98 308 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 TSPY8P0CW00 308 aa7.33□□□□□ -1.24
CHD1-208ENST00000512392 ARAFP10398 606 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms