RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 SENP2Q9HC62 589 aa12.08□□□□□ -0.48
HOXA4-203ENST00000511914 PICK1Q9NRD5 415 aa12.08□□□□□ -0.48
HOXA4-203ENST00000511914 ORC3Q9UBD5 711 aaPredicted RBP12.08□□□□□ -0.48
HOXA4-203ENST00000511914 A0A0G2JLL6 359 aaPredicted RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 PHF20L1A8MW92 1017 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 H3BQV1 296 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 CXCL11O14625 94 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 ADCY3O60266 1144 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 FARP2O94887 1054 aaPredicted RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 FDPSP14324 419 aaKnown RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 PTPRAP18433 802 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 KIF5BP33176 963 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 ADD1P35611 737 aaKnown RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 GNAQP50148 359 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 FAM47AQ5JRC9 791 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 SH3BP5LQ7L8J4 393 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 PRRT2Q7Z6L0 340 aaPredicted RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 UBE2Q1Q7Z7E8 422 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 STK11IPQ8N1F8 1099 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
HOXA4-203ENST00000511914 CDK5RAP2Q96SN8 1893 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 KAT14Q9H8E8 782 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 IL17RBQ9NRM6 502 aa12.07□□□□□ -0.48
HOXA4-203ENST00000511914 TRIOBPQ9H2D6 2365 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 VPS37CA5D8V6 355 aaPredicted RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 DDTLA6NHG4 134 aaPredicted RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 FAM196BA6NMK8 535 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 INHAP05111 366 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 CDC27P30260 824 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 FLT3LGP49771 235 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 NBR1Q14596 966 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 FASTKD5Q7L8L6 764 aaKnown RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 FAM177A1Q8N128 213 aaPredicted RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 CRACR2BQ8N4Y2 399 aaPredicted RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 ANKRD13CQ8N6S4 541 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 FBXO18Q8NFZ0 1043 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 DDX11Q96FC9 970 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 LZTS2Q9BRK4 669 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 HERC5Q9UII4 1024 aaKnown RBP12.06□□□□□ -0.48
HOXA4-203ENST00000511914 AFG3L2Q9Y4W6 797 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 CEP290O15078 2479 aa12.06□□□□□ -0.48
HOXA4-203ENST00000511914 LOC285556D6RIA3 1793 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 DEXIO95424 95 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 SGPL1O95470 568 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 TFRCP02786 760 aaKnown RBP12.05□□□□□ -0.48
HOXA4-203ENST00000511914 TOP1P11387 765 aaKnown RBP12.05□□□□□ -0.48
HOXA4-203ENST00000511914 SMARCA1P28370 1054 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 SLC44A5Q8NCS7 719 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
HOXA4-203ENST00000511914 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 DEFB118Q96PH6 123 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 MYH1P12882 1939 aa12.05□□□□□ -0.48
HOXA4-203ENST00000511914 IGKV6D-41A0A0C4DH26 115 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 POTEB3A0JP26 581 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
HOXA4-203ENST00000511914 TBC1D12O60347 775 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 EVI5O60447 810 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 SHMT1P34896 483 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 FUT2Q10981 343 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 TREML2Q5T2D2 321 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 TATDN1Q6P1N9 297 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 POTEBQ6S5H4 581 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 MTMR4Q9NYA4 1195 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 SYNPO2Q9UMS6 1093 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 NR2E3Q9Y5X4 410 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
HOXA4-203ENST00000511914 NMT2O60551 498 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 XBP1P17861 261 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
HOXA4-203ENST00000511914 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 RESTQ13127 1097 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 TRIM29Q14134 588 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 GRM4Q14833 912 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 MCTP1Q6DN14 999 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 TMTC3Q6ZXV5 915 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 BRAPQ7Z569 592 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 ALG1Q9BT22 464 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 MYL10Q9BUA6 226 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 TRIM34Q9BYJ4 488 aa12.03□□□□□ -0.48
HOXA4-203ENST00000511914 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
HOXA4-203ENST00000511914 SOX1O00570 391 aaPredicted RBP12.02□□□□□ -0.49
HOXA4-203ENST00000511914 TRAK2O60296 914 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 CTNND1O60716 968 aaKnown RBP12.02□□□□□ -0.49
HOXA4-203ENST00000511914 TTLL1O95922 423 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 RXRAP19793 462 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 KRT85P78386 507 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 PXYLP1Q8TE99 480 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
HOXA4-203ENST00000511914 COA7Q96BR5 231 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms