RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 COL6A3P12111 3177 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 RAD21O60216 631 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 SLC25A27O95847 323 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 TTLL1O95922 423 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 FGAP02671 866 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 FGRP09769 529 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 HSPD1P10809 573 aaKnown RBP6.92□□□□□ -1.3
RNF4-217ENST00000511892 COL6A1P12109 1028 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 CYP2C19P33261 490 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 STAT3P40763 770 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 FOXK1P85037 733 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 TFAP4Q01664 338 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 PDE4BQ07343 736 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 NMIQ13287 307 aaPredicted RBP6.92□□□□□ -1.3
RNF4-217ENST00000511892 ALX1Q15699 326 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 MCMDC2Q4G0Z9 681 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 MFSD14CQ5VZR4 134 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 OLFML2BQ68BL8 750 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 NECAB2Q7Z6G3 386 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 DPP9Q86TI2 863 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 ZNF589Q86UQ0 364 aaPredicted RBP6.92□□□□□ -1.3
RNF4-217ENST00000511892 TICAM2Q86XR7 235 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 RIOX2Q8IUF8 465 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 LRRC47Q8N1G4 583 aaKnown RBP6.92□□□□□ -1.3
RNF4-217ENST00000511892 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 OSBPL3Q9H4L5 887 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 MROH8Q9H579 483 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 ZNF287Q9HBT7 754 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 GPHNQ9NQX3 736 aaPredicted RBP6.92□□□□□ -1.3
RNF4-217ENST00000511892 IL17RBQ9NRM6 502 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 ANAPC4Q9UJX5 808 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 RIPK3Q9Y572 518 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 PFASO15067 1338 aa6.92□□□□□ -1.3
RNF4-217ENST00000511892 LRRC37A2A6NM11 1700 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 TRIM6-TRIM34B2RNG4 842 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 TK2O00142 265 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 NMT2O60551 498 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 PGK2P07205 417 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 SLC3A2P08195 630 aaKnown RBP6.91□□□□□ -1.3
RNF4-217ENST00000511892 TSPY3P0CV98 308 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 TSPY8P0CW00 308 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 CYBAP13498 195 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 SDSP20132 328 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 NOVP48745 357 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 PRAMEF19Q5SWL8 479 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 CENPQQ7L2Z9 268 aaPredicted RBP6.91□□□□□ -1.3
RNF4-217ENST00000511892 ABRAQ8N0Z2 381 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 PRPF38AQ8NAV1 312 aaKnown RBP6.91□□□□□ -1.3
RNF4-217ENST00000511892 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 RILPL2Q969X0 211 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 MAML3Q96JK9 1138 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 NBPF3Q9H094 633 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 PRO3102Q9H379 93 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 C11orf49Q9H6J7 331 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 TSHZ2Q9NRE2 1034 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 DDX20Q9UHI6 824 aaKnown RBP6.91□□□□□ -1.3
RNF4-217ENST00000511892 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 LTBP2Q14767 1821 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 CDH23Q9H251 3354 aa6.91□□□□□ -1.3
RNF4-217ENST00000511892 ATP2A1O14983 1001 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 ORC4O43929 436 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 EVI5O60447 810 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 FCER1AP12319 257 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 BMP3P12645 472 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 PDE4AP27815 886 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 CNGA1P29973 690 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 FXR1P51114 621 aaKnown RBP eCLIP6.9□□□□□ -1.3
RNF4-217ENST00000511892 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 RASGRP2Q7LDG7 609 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 KIFC2Q96AC6 838 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 CHMP4CQ96CF2 233 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 MMP19Q99542 508 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 RBM27Q9P2N5 1060 aaKnown RBP6.9□□□□□ -1.3
RNF4-217ENST00000511892 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 NR2E3Q9Y5X4 410 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 BAZ2BQ9UIF8 2168 aaKnown RBP6.9□□□□□ -1.3
RNF4-217ENST00000511892 ZMYM6O95789 1325 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 CCDC171Q6TFL3 1326 aa6.9□□□□□ -1.3
RNF4-217ENST00000511892 DNAJC25-GNG10A0A024R161 153 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 TSPY2A6NKD2 308 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 RANBP6O60518 1105 aaKnown RBP6.89□□□□□ -1.31
RNF4-217ENST00000511892 TAL1P17542 331 aaPredicted RBP6.89□□□□□ -1.31
RNF4-217ENST00000511892 MCCP23508 829 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 COPB2P35606 906 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 HAND2P61296 217 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 KCTD2Q14681 263 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 LRRC26Q2I0M4 334 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 ANO1Q5XXA6 986 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 SNRNP48Q6IEG0 339 aaKnown RBP6.89□□□□□ -1.31
RNF4-217ENST00000511892 KCTD1Q719H9 257 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNF4-217ENST00000511892 TBC1D10CQ8IV04 446 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 C7orf61Q8IZ16 206 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 CPXCR1Q8N123 301 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 GMCL1Q96IK5 515 aa6.89□□□□□ -1.31
RNF4-217ENST00000511892 TINF2Q9BSI4 451 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms