RNA–Protein interactions for RNA: ENST00000511807.1

UBE2B-208, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-208ENST00000511807 NDUFB10O96000 172 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
UBE2B-208ENST00000511807 RARBP10826 455 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
UBE2B-208ENST00000511807 CTDSPL2Q05D32 466 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 KLRC3Q07444 240 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 ZNF792Q3KQV3 632 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
UBE2B-208ENST00000511807 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 REPS2Q8NFH8 660 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 STAG1Q8WVM7 1258 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 TEX13BQ9BXU2 312 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 KRT23Q9C075 422 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 CTDP1Q9Y5B0 961 aaPredicted RBP13.3□□□□□ -0.28
UBE2B-208ENST00000511807 ROBO3Q96MS0 1386 aa13.3□□□□□ -0.28
UBE2B-208ENST00000511807 E7EWF7 191 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 PGK1P00558 417 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 SNRNP48Q6IEG0 339 aaKnown RBP13.29□□□□□ -0.28
UBE2B-208ENST00000511807 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
UBE2B-208ENST00000511807 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
UBE2B-208ENST00000511807 NCOA7Q8NI08 942 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 KIFC2Q96AC6 838 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 TM6SF1Q9BZW5 370 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 TOMM22Q9NS69 142 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 MTMR10Q9NXD2 777 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 NRBP1Q9UHY1 535 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 CNPY2Q9Y2B0 182 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 DIS3Q9Y2L1 958 aaKnown RBP13.29□□□□□ -0.28
UBE2B-208ENST00000511807 LAMA4Q16363 1823 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 SZT2Q5T011 3432 aa13.29□□□□□ -0.28
UBE2B-208ENST00000511807 ZBED4O75132 1171 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 FGRP09769 529 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 AKR1A1P14550 325 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 RNF180Q86T96 592 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 LRRC47Q8N1G4 583 aaKnown RBP13.28□□□□□ -0.28
UBE2B-208ENST00000511807 LENG1Q96BZ8 264 aaPredicted RBP13.28□□□□□ -0.28
UBE2B-208ENST00000511807 IL17RAQ96F46 866 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 JAKMIP1Q96N16 626 aaKnown RBP13.28□□□□□ -0.28
UBE2B-208ENST00000511807 NEK1Q96PY6 1258 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
UBE2B-208ENST00000511807 PHF24Q9UPV7 400 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 STXBP5LQ9Y2K9 1186 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 RIPK3Q9Y572 518 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 RLFQ13129 1914 aa13.28□□□□□ -0.28
UBE2B-208ENST00000511807 FRMPD3Q5JV73 1810 aa13.27□□□□□ -0.28
UBE2B-208ENST00000511807 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 DLL1O00548 723 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 ORC4O43929 436 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.29
UBE2B-208ENST00000511807 TLE2Q04725 743 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 SNX17Q15036 470 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 RABEP1Q15276 862 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 SHHQ15465 462 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 BLOC1S2Q6QNY1 142 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 TBC1D10CQ8IV04 446 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 ESR2Q92731 530 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 BADQ92934 168 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 CEP95Q96GE4 821 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 FAM161BQ96MY7 647 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.29
UBE2B-208ENST00000511807 PDLIM7Q9NR12 457 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
UBE2B-208ENST00000511807 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 TTLL1O95922 423 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 TSPY3P0CV98 308 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 TSPY8P0CW00 308 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 CASTP20810 708 aaKnown RBP13.26□□□□□ -0.29
UBE2B-208ENST00000511807 ADCK5Q3MIX3 580 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 RRP12Q5JTH9 1297 aaKnown RBP13.26□□□□□ -0.29
UBE2B-208ENST00000511807 C9orf50Q5SZB4 431 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 TRIM43Q96BQ3 446 aaPredicted RBP13.26□□□□□ -0.29
UBE2B-208ENST00000511807 CHMP4CQ96CF2 233 aa13.26□□□□□ -0.29
UBE2B-208ENST00000511807 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
UBE2B-208ENST00000511807 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBE2B-208ENST00000511807 A0A1W2PQ45 241 aaPredicted RBP13.25□□□□□ -0.29
UBE2B-208ENST00000511807 A0A1W2PQY0 241 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 POTEB2H3BUK9 544 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
UBE2B-208ENST00000511807 PQBP1O60828 265 aaKnown RBP13.25□□□□□ -0.29
UBE2B-208ENST00000511807 MCM5P33992 734 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 TFAP4Q01664 338 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 CCDC178Q5BJE1 867 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 SLFN13Q68D06 897 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 STOX1Q6ZVD7 989 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 RUFY3Q7L099 469 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 DHX32Q7L7V1 743 aaKnown RBP13.25□□□□□ -0.29
UBE2B-208ENST00000511807 ANKRD35Q8N283 1001 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 MSL3Q8N5Y2 521 aaKnown RBP13.25□□□□□ -0.29
UBE2B-208ENST00000511807 MKL1Q969V6 931 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
UBE2B-208ENST00000511807 FAM184BQ9ULE4 1060 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms