RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 SH2B2O14492 632 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 HMGCRP04035 888 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 INHAP05111 366 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 ICAM1P05362 532 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 HOXC6P09630 235 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 CALM1P0DP23 149 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 CALM2P0DP24 149 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 CALM3P0DP25 149 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 ALAS1P13196 640 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 PSMA5P28066 241 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 LIFRP42702 1097 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 EXOSC10Q01780 885 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 TROAPQ12815 778 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 BLOC1S2Q6QNY1 142 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 ADGRF4Q8IZF3 695 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 NPLOC4Q8TAT6 608 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 TRIB2Q92519 343 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 AGBL1Q96MI9 1066 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 JAKMIP1Q96N16 626 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 MAP3K14Q99558 947 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 TMEM106CQ9BVX2 250 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 LRRC2Q9BYS8 371 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 GPHNQ9NQX3 736 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 TSHZ2Q9NRE2 1034 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 HOMER2Q9NSB8 354 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 MAD2L2Q9UI95 211 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 CCPG1Q9ULG6 757 aa8.34□□□□□ -1.07
PDLIM5-215ENST00000511586 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 COBLO75128 1261 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 DDAH1O94760 285 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 CCL5P13501 91 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 KIF5BP33176 963 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 GNAQP50148 359 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 FGD1P98174 961 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 GRM4Q14833 912 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 CCL14Q16627 93 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 MFSD14CQ5VZR4 134 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 SGMS1Q86VZ5 419 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 ZNF654Q8IZM8 581 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 ANKRD35Q8N283 1001 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 STAG2Q8N3U4 1231 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 CTCFLQ8NI51 663 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 NUP133Q8WUM0 1156 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 RNF208Q9H0X6 261 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 CPVLQ9H3G5 476 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 ACAD9Q9H845 621 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 VAT1LQ9HCJ6 419 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 RNF146Q9NTX7 359 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 DIS3Q9Y2L1 958 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 SLC12A7Q9Y666 1083 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
PDLIM5-215ENST00000511586 RPTORQ8N122 1335 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 DNAJC25-GNG10A0A024R161 153 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 PGK2P07205 417 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 CASTP20810 708 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 SOX10P56693 466 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 MTFR1Q15390 333 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 CDC37Q16543 378 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 ZNF792Q3KQV3 632 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 OLFML2BQ68BL8 750 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 FANCBQ8NB91 859 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 MAML3Q96JK9 1138 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 TCEANC2Q96MN5 208 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 LZTS2Q9BRK4 669 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 MYL10Q9BUA6 226 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 RIOX1Q9H6W3 641 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 JMJD4Q9H9V9 463 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 HMX1Q9NP08 348 aaPredicted RBP8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 FLRT1Q9NZU1 646 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 DOCK3Q8IZD9 2030 aa8.32□□□□□ -1.08
PDLIM5-215ENST00000511586 PFASO15067 1338 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 COL11A1P12107 1806 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 POTEFA5A3E0 1075 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 POTEB2H3BUK9 544 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 ZBTB5O15062 677 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 ZBTB43O43298 467 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 IGHA2P01877 340 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 GJB1P08034 283 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 PRKAR2AP13861 404 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 CPA1P15085 419 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 RPS6KB1P23443 525 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 SMARCA1P28370 1054 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 CYP2C19P33261 490 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 TRIM32Q13049 653 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 TRAF1Q13077 416 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 QRICH1Q2TAL8 776 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 MUM1L1Q5H9M0 696 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 MAP3K21Q5TCX8 1036 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 APOA5Q6Q788 366 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 Q6ZUG5 572 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 RUFY3Q7L099 469 aa8.31□□□□□ -1.08
PDLIM5-215ENST00000511586 ZNF467Q7Z7K2 595 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms