RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 LZTS2Q9BRK4 669 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 AGXT2Q9BYV1 514 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 UPF3BQ9BZI7 483 aaKnown RBP14.97□□□□□ -0.01
COL6A6-203ENST00000511332 RAVER2Q9HCJ3 691 aaKnown RBP14.97□□□□□ -0.01
COL6A6-203ENST00000511332 FBXO40Q9UH90 709 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 NID2Q14112 1375 aa14.97□□□□□ -0.01
COL6A6-203ENST00000511332 KLF18A0A0U1RQI7 1052 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 SLC15A5A6NIM6 579 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 GOLGA8BA8MQT2 603 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 ZBTB43O43298 467 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 PRKCZQ05513 592 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 TKFCQ3LXA3 575 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 COL13A1Q5TAT6 717 aaPredicted RBP14.96□□□□□ -0.01
COL6A6-203ENST00000511332 CCDC174Q6PII3 467 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 ADGRF4Q8IZF3 695 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 STAG2Q8N3U4 1231 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 NUDT12Q9BQG2 462 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 C22orf23Q9BZE7 217 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 UBA5Q9GZZ9 404 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.01
COL6A6-203ENST00000511332 BAZ2BQ9UIF8 2168 aaKnown RBP14.96□□□□□ -0.01
COL6A6-203ENST00000511332 CCPG1Q9ULG6 757 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 PTPN22Q9Y2R2 807 aa14.96□□□□□ -0.01
COL6A6-203ENST00000511332 LCTP09848 1927 aa14.96□□□□□ -0.02
COL6A6-203ENST00000511332 ZNF536O15090 1300 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 STRNO43815 780 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 RBM25P49756 843 aaKnown RBP14.95□□□□□ -0.02
COL6A6-203ENST00000511332 GRB14Q14449 540 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 CDC37Q16543 378 aaPredicted RBP14.95□□□□□ -0.02
COL6A6-203ENST00000511332 ABRAQ8N0Z2 381 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 RAET1EQ8TD07 263 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 APBA2Q99767 749 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 CPVLQ9H3G5 476 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 PDRG1Q9NUG6 133 aa14.95□□□□□ -0.02
COL6A6-203ENST00000511332 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
COL6A6-203ENST00000511332 GOLGA8AA7E2F4 631 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 FCER1AP12319 257 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 RXRAP19793 462 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 PTPREP23469 700 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 RGS2P41220 211 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 FLT3LGP49771 235 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL6A6-203ENST00000511332 SNAP25P60880 206 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 TRAF1Q13077 416 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 IRF5Q13568 498 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 KCTD2Q14681 263 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 PPP2R5BQ15173 497 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 ANKRD1Q15327 319 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 RTN1Q16799 776 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 MORN1Q5T089 497 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL6A6-203ENST00000511332 CCDC144CPQ8IYA2 1237 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 FANCBQ8NB91 859 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 AGBL1Q96MI9 1066 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 MMP19Q99542 508 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 MCOLN1Q9GZU1 580 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 ACAD9Q9H845 621 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 RNF146Q9NTX7 359 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 BRPF3Q9ULD4 1205 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 PTCH2Q9Y6C5 1203 aa14.94□□□□□ -0.02
COL6A6-203ENST00000511332 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 ZBTB5O15062 677 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 ALAS1P13196 640 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 TOB2Q14106 344 aaPredicted RBP14.93□□□□□ -0.02
COL6A6-203ENST00000511332 QRICH1Q2TAL8 776 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 TMTC3Q6ZXV5 915 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 RAB11FIP4Q86YS3 637 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 SLAIN1Q8ND83 568 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 ALDH8A1Q9H2A2 487 aaPredicted RBP14.93□□□□□ -0.02
COL6A6-203ENST00000511332 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 JMJD4Q9H9V9 463 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 HOMER2Q9NSB8 354 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 SLC5A4Q9NY91 659 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 SEC63Q9UGP8 760 aaKnown RBP14.93□□□□□ -0.02
COL6A6-203ENST00000511332 GABRQQ9UN88 632 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 RIPK3Q9Y572 518 aa14.93□□□□□ -0.02
COL6A6-203ENST00000511332 PFASO15067 1338 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 ABCB11O95342 1321 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 LRRC37A2A6NM11 1700 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 PLEKHA8P1O95397 391 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 XRCC5P13010 732 aaKnown RBP14.92□□□□□ -0.02
COL6A6-203ENST00000511332 ADORA2AP29274 412 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 EVCP57679 992 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 SLC9C1Q4G0N8 1177 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 FBXO11Q86XK2 927 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
COL6A6-203ENST00000511332 TNS4Q8IZW8 715 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 MTMR8Q96EF0 704 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 RRP36Q96EU6 259 aaKnown RBP14.92□□□□□ -0.02
COL6A6-203ENST00000511332 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 BACH2Q9BYV9 841 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 GJD2Q9UKL4 321 aa14.92□□□□□ -0.02
COL6A6-203ENST00000511332 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms