RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 VSTM4Q8IW00 320 aa14.6□□□□□ -0.07
HMGB2-205ENST00000511316 NCOA5Q9HCD5 579 aaKnown RBP14.6□□□□□ -0.07
HMGB2-205ENST00000511316 SAP30BPQ9UHR5 308 aaKnown RBP14.6□□□□□ -0.07
HMGB2-205ENST00000511316 CENPFP49454 3210 aa14.6□□□□□ -0.07
HMGB2-205ENST00000511316 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 IRF6O14896 467 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 MBD4O95243 580 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 TUBBP07437 444 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 RCAN1P53805 252 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 GABPAQ06546 454 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 MOGSQ13724 837 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 GNL2Q13823 731 aaKnown RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 ARID5BQ14865 1188 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 SHROOM1Q2M3G4 852 aaPredicted RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 SYT10Q6XYQ8 523 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 FOXP4Q8IVH2 680 aaPredicted RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.071e-18■■□□□ 11.8
HMGB2-205ENST00000511316 RNF186Q9NXI6 227 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 NEDD4P46934 1319 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 FOXP2O15409 715 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 PTPRAP18433 802 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 RESP18Q5W5W9 173 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 GPR161Q8N6U8 529 aaKnown RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 MLKLQ8NB16 471 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 NAA15Q9BXJ9 866 aaKnown RBP14.59□□□□□ -0.07
HMGB2-205ENST00000511316 R3HDMLQ9H3Y0 253 aa14.59□□□□□ -0.07
HMGB2-205ENST00000511316 GSG1L2A8MUP6 293 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 M0R2C6 588 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 IGF2BP3O00425 579 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGB2-205ENST00000511316 ARHGAP29Q52LW3 1261 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.58□□□□□ -0.08
HMGB2-205ENST00000511316 CEP131Q9UPN4 1083 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 HTTP42858 3142 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 LAMB1P07942 1786 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 NID2Q14112 1375 aa14.58□□□□□ -0.08
HMGB2-205ENST00000511316 DTNBO60941 627 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 HSPA8P11142 646 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 GUCY1B3Q02153 619 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 PPATQ06203 517 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 SAFBQ15424 915 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 SLC4A8Q2Y0W8 1093 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 TATDN1Q6P1N9 297 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 BRI3BPQ8WY22 251 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 HERC5Q9UII4 1024 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 TSKSQ9UJT2 592 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 HPS5Q9UPZ3 1129 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 KCNH4Q9UQ05 1017 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 CSADQ9Y600 493 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 DDX60LQ5H9U9 1706 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 MYH7P12883 1935 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 TRPA1O75762 1119 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 FGAP02671 866 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 CYP2D6P10635 497 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 CAP2P40123 477 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 USP5P45974 858 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 METAP2P50579 478 aaKnown RBP eCLIP14.57□□□□□ -0.081e-323■□□□□ 8.4
HMGB2-205ENST00000511316 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 SCYL3Q8IZE3 742 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 TXLNBQ8N3L3 684 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 ALG1Q9BT22 464 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 CRNKL1Q9BZJ0 848 aaKnown RBP14.57□□□□□ -0.08
HMGB2-205ENST00000511316 EHD4Q9H223 541 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 CNNM2Q9H8M5 875 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 ATP8A2Q9NTI2 1148 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 AFG3L2Q9Y4W6 797 aa14.57□□□□□ -0.08
HMGB2-205ENST00000511316 TADA3O75528 432 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 POLR3DP05423 398 aaPredicted RBP14.56□□□□□ -0.08
HMGB2-205ENST00000511316 INHBEP58166 350 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 PPP2R5BQ15173 497 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 ALX1Q15699 326 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
HMGB2-205ENST00000511316 SGMS1Q86VZ5 419 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 IFNL1Q8IU54 200 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 KRI1Q8N9T8 703 aaKnown RBP14.56□□□□□ -0.08
HMGB2-205ENST00000511316 RABGGTAQ92696 567 aa14.56□□□□□ -0.08
HMGB2-205ENST00000511316 EPB41L4AQ9HCS5 686 aaPredicted RBP14.56□□□□□ -0.08
HMGB2-205ENST00000511316 MANSC4A6NHS7 340 aaPredicted RBP14.55□□□□□ -0.08
HMGB2-205ENST00000511316 GPAA1O43292 621 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 ZRANB2O95218 330 aaKnown RBP eCLIP14.55□□□□□ -0.081e-7■■■■■ 30.6
HMGB2-205ENST00000511316 PNMA6AP0CW24 399 aaPredicted RBP14.55□□□□□ -0.08
HMGB2-205ENST00000511316 ERCC5P28715 1186 aaPredicted RBP14.55□□□□□ -0.08
HMGB2-205ENST00000511316 CASQ1P31415 396 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 SHMT1P34896 483 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 LIFRP42702 1097 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 CLCN6P51797 869 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 LBX1P52954 281 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 FOSBP53539 338 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 PPIL2Q13356 520 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 NT5DC1Q5TFE4 455 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 KRBA2Q6ZNG9 492 aa14.55□□□□□ -0.08
HMGB2-205ENST00000511316 CNNM3Q8NE01 707 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms