RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 VCAM1P19320 739 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 NR5A1Q13285 461 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 PPIL2Q13356 520 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
SGCA-207ENST00000511303 MTMR2Q13614 643 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 TTLL12Q14166 644 aaPredicted RBP13.66□□□□□ -0.22
SGCA-207ENST00000511303 SLC39A14Q15043 492 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 ANO1Q5XXA6 986 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 LINC00301Q8NCQ3 95 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 OXER1Q8TDS5 423 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 CUL5Q93034 780 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 USP28Q96RU2 1077 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 HOXC10Q9NYD6 342 aa13.66□□□□□ -0.22
SGCA-207ENST00000511303 MYH4Q9Y623 1939 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 CCDC194A0A1B0GVG4 234 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 GOLGA6L4A6NEF3 574 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 TRIM75PA6NK02 468 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L15C9J2P7 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L13C9JLJ4 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L11C9JVI0 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L18D6R9N7 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L22D6RA61 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L17D6RBQ6 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L19D6RCP7 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L20D6RJB6 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 FIBPO43427 364 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 PPP6R2O75170 966 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 FOSP01100 380 aaPredicted RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 ADCY7P51828 1080 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 USP17L24Q0WX57 530 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 PRKG1Q13976 671 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 ZYXQ15942 572 aaKnown RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 MAP1SQ66K74 1059 aaPredicted RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 CCDC84Q86UT8 332 aaPredicted RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 REXO1Q8N1G1 1221 aaKnown RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 COA7Q96BR5 231 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 KCNH4Q9UQ05 1017 aa13.65□□□□□ -0.22
SGCA-207ENST00000511303 MRPL11Q9Y3B7 192 aaKnown RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
SGCA-207ENST00000511303 PPP1R11O60927 126 aaPredicted RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 ZBED4O75132 1171 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 HOXA7P31268 230 aaPredicted RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 OAZ1P54368 228 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 COG2Q14746 738 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 STK38Q15208 465 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 SF3A1Q15459 793 aaKnown RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 CHADLQ6NUI6 762 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 CATSPERGQ6ZRH7 1159 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 FASTKD5Q7L8L6 764 aaKnown RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 C2orf69Q8N8R5 385 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 KIFC2Q96AC6 838 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 RPAP3Q9H6T3 665 aaPredicted RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
SGCA-207ENST00000511303 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 ADAMTS5Q9UNA0 930 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
SGCA-207ENST00000511303 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 A0A0G2JLL6 359 aaPredicted RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 PIK3CDO00329 1044 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 SPTLC2O15270 562 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 ICAM1P05362 532 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 POTEJP0CG39 1038 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 TOB1P50616 345 aaPredicted RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 HMGCS2P54868 508 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 NBR1Q14596 966 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 NONOQ15233 471 aaKnown RBP eCLIP13.63□□□□□ -0.23
SGCA-207ENST00000511303 ADALQ6DHV7 355 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 DLK2Q6UY11 383 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 PRRT2Q7Z6L0 340 aaPredicted RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 CHAMP1Q96JM3 812 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 SLC38A10Q9HBR0 1119 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 GDPD2Q9HCC8 539 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 FZD1Q9UP38 647 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 CTDP1Q9Y5B0 961 aaPredicted RBP13.63□□□□□ -0.23
SGCA-207ENST00000511303 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 ABCB11O95342 1321 aa13.63□□□□□ -0.23
SGCA-207ENST00000511303 BAZ2BQ9UIF8 2168 aaKnown RBP13.62□□□□□ -0.23
SGCA-207ENST00000511303 DOCK1Q14185 1865 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 A0A1W2PQ27 194 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 A0A1W2PQ64 194 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 A0A1W2PQD8 194 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 LAD1O00515 517 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 ATP2A1O14983 1001 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 FLOT1O75955 427 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 DSG3P32926 999 aa13.62□□□□□ -0.23
SGCA-207ENST00000511303 PABPC4Q13310 644 aaKnown RBP eCLIP13.62□□□□□ -0.23
SGCA-207ENST00000511303 PTPAQ15257 358 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms