RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CARNS1A5YM72 827 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 RNF223E7ERA6 249 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 TNPO2O14787 897 aaKnown RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 PEX10O60683 326 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 EN2P19622 333 aaPredicted RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 GUCY1A2P33402 732 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 GCLCP48506 637 aaPredicted RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 IRX3P78415 501 aaPredicted RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 RAB3GAP1Q15042 981 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 ZYXQ15942 572 aaKnown RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 FAM110CQ1W6H9 321 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 ACER1Q8TDN7 264 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 DYNLL2Q96FJ2 89 aa10.34□□□□□ -0.75
PDPN-209ENST00000510906 P2RX7Q99572 595 aaKnown RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 PUS7LQ9H0K6 701 aaKnown RBP10.34□□□□□ -0.75
PDPN-209ENST00000510906 DDX60LQ5H9U9 1706 aaKnown RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 KIAA0100Q14667 2235 aaKnown RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 ESPNB1AK53 854 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L15C9J2P7 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L13C9JLJ4 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L12C9JPN9 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L11C9JVI0 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L21D6R901 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L18D6R9N7 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L22D6RA61 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L17D6RBQ6 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L19D6RCP7 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L20D6RJB6 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 HOXA7P31268 230 aaPredicted RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 GRK4P32298 578 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 FLT3LGP49771 235 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 KCNA1Q09470 495 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 USP17L24Q0WX57 530 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 PTK7Q13308 1070 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 SEPT2Q15019 361 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 MTFR1Q15390 333 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 CRTC2Q53ET0 693 aaPredicted RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 ZSCAN25Q6NSZ9 544 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 KBTBD3Q8NAB2 608 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 PI4K2BQ8TCG2 481 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 FEZ1Q99689 392 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 CABP5Q9NP86 173 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 ATP8A2Q9NTI2 1148 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 NOVA2Q9UNW9 492 aaKnown RBP10.33□□□□□ -0.76
PDPN-209ENST00000510906 SLC4A4Q9Y6R1 1079 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 LOC285556D6RIA3 1793 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 ATAD5Q96QE3 1844 aa10.33□□□□□ -0.76
PDPN-209ENST00000510906 MPHOSPH10O00566 681 aaKnown RBP10.32□□□□□ -0.76
PDPN-209ENST00000510906 ELNP15502 786 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 HERVK_113P62684 666 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 TSGA10IPQ3SY00 556 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 C12orf60Q5U649 245 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 STK32AQ8WU08 396 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 OSBP2Q969R2 916 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 C12orf42Q96LP6 360 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 TXNRD2Q9NNW7 524 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 MORF4L1Q9UBU8 362 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 MYH1P12882 1939 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 TTC41PQ6P2S7 1318 aa10.32□□□□□ -0.76
PDPN-209ENST00000510906 A0A1W2PRG0 241 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 RNF113AO15541 343 aaKnown RBP10.31□□□□□ -0.76
PDPN-209ENST00000510906 ADCY3O60266 1144 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 AKR1B1P15121 316 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 VCAM1P19320 739 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 USP14P54578 494 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 TRIM32Q13049 653 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 AGERQ15109 404 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 EML3Q32P44 896 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 NBPF20Q3BBV1 942 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 ANKRD45Q5TZF3 282 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 CLEC10AQ8IUN9 316 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 APPBP2Q92624 585 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 COA7Q96BR5 231 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 GCC1Q96CN9 775 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 STRBPQ96SI9 672 aaKnown RBP10.31□□□□□ -0.76
PDPN-209ENST00000510906 RBPJLQ9UBG7 517 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 BIN2Q9UBW5 565 aaPredicted RBP10.31□□□□□ -0.76
PDPN-209ENST00000510906 SWAP70Q9UH65 585 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 CDV3Q9UKY7 258 aaKnown RBP10.31□□□□□ -0.76
PDPN-209ENST00000510906 NAV1Q8NEY1 1877 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 SALL3Q9BXA9 1300 aa10.31□□□□□ -0.76
PDPN-209ENST00000510906 GSG1L2A8MUP6 293 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 M0R2C6 588 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 ERC2O15083 957 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 GPAA1O43292 621 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 GLRX3O76003 335 aaKnown RBP10.3□□□□□ -0.76
PDPN-209ENST00000510906 CCL5P13501 91 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 MX1P20591 662 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 CDK8P49336 464 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 WNT7BP56706 349 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 HDAC1Q13547 482 aaPredicted RBP10.3□□□□□ -0.76
PDPN-209ENST00000510906 RNF20Q5VTR2 975 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 CTR9Q6PD62 1173 aa10.3□□□□□ -0.76
PDPN-209ENST00000510906 TMEM179Q6ZVK1 233 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms