RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ABCC4O15439 1325 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 CCNT1O60563 726 aaKnown RBP9.13□□□□□ -0.95
HTT-208ENST00000510626 ATP5JP18859 108 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 LONP1P36776 959 aaKnown RBP9.13□□□□□ -0.95
HTT-208ENST00000510626 TAF11Q15544 211 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 VPS16Q9H269 839 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 SYNMO15061 1565 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 VAT1LQ9HCJ6 419 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 PCDHB13Q9Y5F0 798 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 HSP90AA4PQ58FG1 418 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 REXO1Q8N1G1 1221 aaKnown RBP9.13□□□□□ -0.95
HTT-208ENST00000510626 CHL1O00533 1208 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 NR1I2O75469 434 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 PPP4R3CPQ6ZMV5 832 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 GPT2Q8TD30 523 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ARMCX3Q9UH62 379 aaPredicted RBP9.13□□□□□ -0.95
HTT-208ENST00000510626 TCHHQ07283 1943 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 CHGBP05060 677 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 PFKFB1P16118 471 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 ADRM1Q16186 407 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 TESK2Q96S53 571 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 THAP9Q9H5L6 903 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
HTT-208ENST00000510626 VGLL3A8MV65 326 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 HSPA13P48723 471 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 TTC6Q86TZ1 520 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 OSBPL3Q9H4L5 887 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 SBNO2Q9Y2G9 1366 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 GRID2IPA4D2P6 1211 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 PODXLO00592 558 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 SRGAP2BP0DMP2 458 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 XAGE3Q8WTP9 111 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 PAWRQ96IZ0 340 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 TRPM2O94759 1503 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 FAM177BA6PVY3 158 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 ESRRBO95718 433 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 NONOQ15233 471 aaKnown RBP eCLIP9.12□□□□□ -0.95
HTT-208ENST00000510626 ARHGAP27Q6ZUM4 889 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 EMILIN1Q9Y6C2 1016 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 RASSF10A6NK89 507 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 PYGBP11216 843 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 SERPINB10P48595 397 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 CASP8Q14790 479 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 C10orf88Q9H8K7 445 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 MRPL44Q9H9J2 332 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 CUL4BQ13620 913 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 TEX11Q8IYF3 940 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 ARHGEF35A5YM69 484 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 SPAG7O75391 227 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 CUL4AQ13619 759 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 MAP7D3Q8IWC1 876 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 CHCHD3Q9NX63 227 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 SEPT3Q9UH03 358 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 ZNF148Q9UQR1 794 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 ALCAMQ13740 583 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 KIF2CQ99661 725 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 C19orf44Q9H6X5 657 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 ATXN2Q99700 1313 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 hCG_1984214I3L0E3 225 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 CTNND1O60716 968 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 STAM2O75886 525 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 KIF1BO60333 1816 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 GPATCH8Q9UKJ3 1502 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 SESN3P58005 492 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 H2AFZP0C0S5 128 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 YY1P25490 414 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 RWDD2BP57060 319 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 HADHQ16836 314 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 KRT40Q6A162 431 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 H2AFVQ71UI9 128 aa9.12□□□□□ -0.95
HTT-208ENST00000510626 OSBPL5Q9H0X9 879 aaPredicted RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 UPF3AQ9H1J1 476 aaKnown RBP9.12□□□□□ -0.95
HTT-208ENST00000510626 CCDC188H7C350 402 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 MPRIPQ6WCQ1 1025 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 RAPGEF6Q8TEU7 1601 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 STXBP3O00186 592 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 PSMD2Q13200 908 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 MYOCDQ8IZQ8 938 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 MTMR6Q9Y217 621 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 SEC24BO95487 1268 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 RSPH3Q86UC2 560 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 XAB2Q9HCS7 855 aaKnown RBP9.11□□□□□ -0.95
HTT-208ENST00000510626 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 EEF1DP29692 281 aaKnown RBP9.11□□□□□ -0.95
HTT-208ENST00000510626 GRAMD4Q6IC98 578 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 NRDE2Q9H7Z3 1164 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 RWDD2AQ9UIY3 292 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 MROH5Q6ZUA9 1318 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 ENO4A6NNW6 628 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 ZNF174Q15697 407 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 BAG2O95816 211 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 TNNI3KQ59H18 835 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.11□□□□□ -0.95
HTT-208ENST00000510626 ENOX1Q8TC92 643 aaKnown RBP9.11□□□□□ -0.95
HTT-208ENST00000510626 FMO2Q99518 471 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 TRIM55Q9BYV6 548 aa9.11□□□□□ -0.95
HTT-208ENST00000510626 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.11□□□□□ -0.95
HTT-208ENST00000510626 FPGT-TNNI3KV9GXZ4 949 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms