RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 AGBL1Q96MI9 1066 aa27.07■■□□□ 1.92
SNF8-209ENST00000510558 CNPY2Q9Y2B0 182 aa27.07■■□□□ 1.92
SNF8-209ENST00000510558 SNAP25P60880 206 aa27.06■■□□□ 1.92
SNF8-209ENST00000510558 ACAD9Q9H845 621 aa27.06■■□□□ 1.92
SNF8-209ENST00000510558 RNF146Q9NTX7 359 aa27.06■■□□□ 1.92
SNF8-209ENST00000510558 SYNGAP1Q96PV0 1343 aa27.06■■□□□ 1.92
SNF8-209ENST00000510558 KBTBD13C9JR72 458 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 ZNF865P0CJ78 1059 aaPredicted RBP27.05■■□□□ 1.92
SNF8-209ENST00000510558 SYN1P17600 705 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 TKFCQ3LXA3 575 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 TTBK2Q6IQ55 1244 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 CCDC174Q6PII3 467 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 MAMDC4Q6UXC1 1216 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 ZNF467Q7Z7K2 595 aaPredicted RBP27.05■■□□□ 1.92
SNF8-209ENST00000510558 TTC14Q96N46 770 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 IL25Q9H293 177 aa27.05■■□□□ 1.92
SNF8-209ENST00000510558 MYCNP04198 464 aaPredicted RBP27.04■■□□□ 1.92
SNF8-209ENST00000510558 RARBP10826 455 aa27.04■■□□□ 1.92
SNF8-209ENST00000510558 FGD4Q96M96 766 aa27.04■■□□□ 1.92
SNF8-209ENST00000510558 FRMPD2Q68DX3 1309 aaPredicted RBP27.04■■□□□ 1.92
SNF8-209ENST00000510558 SNAI1O95863 264 aaPredicted RBP27.03■■□□□ 1.92
SNF8-209ENST00000510558 PDHBP11177 359 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 ALAS1P13196 640 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 AKR1A1P14550 325 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 SLC16A2P36021 539 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 NT5C2P49902 561 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 ATN1P54259 1190 aaPredicted RBP27.03■■□□□ 1.92
SNF8-209ENST00000510558 LRRC41Q15345 812 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 IMMTQ16891 758 aaKnown RBP27.03■■□□□ 1.92
SNF8-209ENST00000510558 BTNL9Q6UXG8 535 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 TRERF1Q96PN7 1200 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 ZKSCAN3Q9BRR0 538 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 GPCPD1Q9NPB8 672 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 XPNPEP3Q9NQH7 507 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 CTNNA3Q9UI47 895 aa27.03■■□□□ 1.92
SNF8-209ENST00000510558 SYDE2Q5VT97 1194 aa27.02■■□□□ 1.92
SNF8-209ENST00000510558 RANBP17Q9H2T7 1088 aaKnown RBP27.02■■□□□ 1.92
SNF8-209ENST00000510558 A1CFQ9NQ94 594 aaKnown RBP27.02■■□□□ 1.92
SNF8-209ENST00000510558 RAD50Q92878 1312 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 POTEB2H3BUK9 544 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 KDM4AO75164 1064 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 CNTN2Q02246 1040 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 GDF15Q99988 308 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.01■■□□□ 1.91
SNF8-209ENST00000510558 ZHX1Q9UKY1 873 aaPredicted RBP27.01■■□□□ 1.91
SNF8-209ENST00000510558 CCPG1Q9ULG6 757 aa27.01■■□□□ 1.91
SNF8-209ENST00000510558 B4E1Z4 1266 aa27■■□□□ 1.91
SNF8-209ENST00000510558 ICAM1P05362 532 aa27■■□□□ 1.91
SNF8-209ENST00000510558 IQCA1Q86XH1 822 aa27■■□□□ 1.91
SNF8-209ENST00000510558 DGKHQ86XP1 1220 aa27■■□□□ 1.91
SNF8-209ENST00000510558 FAM133AQ8N9E0 248 aa27■■□□□ 1.91
SNF8-209ENST00000510558 LENG1Q96BZ8 264 aaPredicted RBP27■■□□□ 1.91
SNF8-209ENST00000510558 LCTP09848 1927 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 A0A1W2PPC1 479 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 PGK1P00558 417 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 SNHG28P0DPA3 235 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 ZNF543Q08ER8 600 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 CCDC178Q5BJE1 867 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 MUM1L1Q5H9M0 696 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 ARMCX2Q7L311 632 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 FAM184BQ9ULE4 1060 aa26.99■■□□□ 1.91
SNF8-209ENST00000510558 ADCYAP1R1P41586 468 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 MAGEA10P43363 369 aaPredicted RBP26.98■■□□□ 1.91
SNF8-209ENST00000510558 RTP1P59025 263 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 ACVR2BQ13705 512 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 RNF180Q86T96 592 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 RUFY2Q8WXA3 655 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 ABHD16BQ9H3Z7 469 aa26.98■■□□□ 1.91
SNF8-209ENST00000510558 RANBP2P49792 3224 aaKnown RBP26.98■■□□□ 1.91
SNF8-209ENST00000510558 CHMLP26374 656 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 BMP8BP34820 402 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 SLC39A5Q6ZMH5 540 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 CCDC144CPQ8IYA2 1237 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 FERMT2Q96AC1 680 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 KRT23Q9C075 422 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 ZSWIM5Q9P217 1185 aa26.97■■□□□ 1.91
SNF8-209ENST00000510558 LRRC37A2A6NM11 1700 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 SOWAHBA6NEL2 793 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 ZSCAN10Q96SZ4 725 aaPredicted RBP26.96■■□□□ 1.91
SNF8-209ENST00000510558 CNNM2Q9H8M5 875 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 CYP39A1Q9NYL5 469 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 PCDH10Q9P2E7 1040 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 PHF24Q9UPV7 400 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 ATP11BQ9Y2G3 1177 aa26.96■■□□□ 1.91
SNF8-209ENST00000510558 SYNRGQ9UMZ2 1314 aa26.95■■□□□ 1.91
SNF8-209ENST00000510558 ADAMTS4O75173 837 aa26.95■■□□□ 1.9
SNF8-209ENST00000510558 GPATCH4Q5T3I0 446 aaKnown RBP26.95■■□□□ 1.9
SNF8-209ENST00000510558 NSMFQ6X4W1 530 aa26.95■■□□□ 1.9
SNF8-209ENST00000510558 PNMA1Q8ND90 353 aa26.95■■□□□ 1.9
SNF8-209ENST00000510558 ANKS1AQ92625 1134 aa26.95■■□□□ 1.9
SNF8-209ENST00000510558 KAT14Q9H8E8 782 aa26.95■■□□□ 1.9
SNF8-209ENST00000510558 SNX17Q15036 470 aa26.94■■□□□ 1.9
SNF8-209ENST00000510558 CCDC144BQ3MJ40 725 aa26.94■■□□□ 1.9
SNF8-209ENST00000510558 ENAHQ8N8S7 591 aaPredicted RBP26.94■■□□□ 1.9
SNF8-209ENST00000510558 KATNBL1Q9H079 304 aa26.94■■□□□ 1.9
SNF8-209ENST00000510558 DNAH12Q6ZR08 3092 aa26.93■■□□□ 1.9
SNF8-209ENST00000510558 ASTN1O14525 1302 aa26.93■■□□□ 1.9
SNF8-209ENST00000510558 TNKSO95271 1327 aa26.93■■□□□ 1.9
SNF8-209ENST00000510558 ASB14A6NK59 587 aa26.93■■□□□ 1.9
SNF8-209ENST00000510558 DUSP11O75319 330 aaKnown RBP26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms