RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 LRRC26Q2I0M4 334 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 DCAF4Q8WV16 495 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 IPO9Q96P70 1041 aaKnown RBP12.14□□□□□ -0.47
PFDN1-203ENST00000510217 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 MTMR7Q9Y216 660 aa12.14□□□□□ -0.47
PFDN1-203ENST00000510217 CTDP1Q9Y5B0 961 aaPredicted RBP12.14□□□□□ -0.47
PFDN1-203ENST00000510217 SYNGAP1Q96PV0 1343 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 CEP290O15078 2479 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 ZNF865P0CJ78 1059 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 FDX1P10109 184 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 TAL1P17542 331 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 SNAP25P60880 206 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 CCDC96Q2M329 555 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 GJC2Q5T442 439 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 MFSD6Q6ZSS7 791 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 CHST13Q8NET6 341 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 CHURC1Q8WUH1 139 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 RNF41Q9H4P4 317 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 PRR12Q9ULL5 1215 aa12.13□□□□□ -0.47
PFDN1-203ENST00000510217 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
PFDN1-203ENST00000510217 FRMPD2Q68DX3 1309 aaPredicted RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 RAD50Q92878 1312 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 ZNF213O14771 459 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 PDHBP11177 359 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 MAMDC4Q6UXC1 1216 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 ZNF467Q7Z7K2 595 aaPredicted RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 ESR2Q92731 530 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 LENG1Q96BZ8 264 aaPredicted RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 DDX11Q96FC9 970 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 RANBP17Q9H2T7 1088 aaKnown RBP12.12□□□□□ -0.47
PFDN1-203ENST00000510217 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
PFDN1-203ENST00000510217 RANBP2P49792 3224 aaKnown RBP12.11□□□□□ -0.47
PFDN1-203ENST00000510217 DNAH12Q6ZR08 3092 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 SNAI1O95863 264 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-203ENST00000510217 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 SYN1P17600 705 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 SLC16A2P36021 539 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 LRRC41Q15345 812 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 ANKRD35Q8N283 1001 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 ZKSCAN3Q9BRR0 538 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
PFDN1-203ENST00000510217 A1CFQ9NQ94 594 aaKnown RBP12.11□□□□□ -0.47
PFDN1-203ENST00000510217 CNPY2Q9Y2B0 182 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 ASTN1O14525 1302 aa12.11□□□□□ -0.47
PFDN1-203ENST00000510217 KDM4AO75164 1064 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 ICAM1P05362 532 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 RARBP10826 455 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 ALAS1P13196 640 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 AKR1A1P14550 325 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 NT5C2P49902 561 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
PFDN1-203ENST00000510217 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 ZNF543Q08ER8 600 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
PFDN1-203ENST00000510217 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 MUM1L1Q5H9M0 696 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 SYDE2Q5VT97 1194 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 FAM133AQ8N9E0 248 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 TRERF1Q96PN7 1200 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 GDF15Q99988 308 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 GPCPD1Q9NPB8 672 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
PFDN1-203ENST00000510217 B4E1Z4 1266 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 ADCY6O43306 1168 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 ADAMTS4O75173 837 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 PGK1P00558 417 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 CHMLP26374 656 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 MAGEA10P43363 369 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-203ENST00000510217 SNX17Q15036 470 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 CCDC144CPQ8IYA2 1237 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 TTC14Q96N46 770 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 KATNBL1Q9H079 304 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-203ENST00000510217 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
PFDN1-203ENST00000510217 SYNRGQ9UMZ2 1314 aa12.09□□□□□ -0.47
PFDN1-203ENST00000510217 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.47
PFDN1-203ENST00000510217 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
PFDN1-203ENST00000510217 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms