RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 CAMKK2Q96RR4 588 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 PYM1Q9BRP8 204 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 MXD3Q9BW11 206 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 MRIQ9BWK5 157 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 ZMYND12Q9H0C1 365 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 TMX4Q9H1E5 349 aaPredicted RBP5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 HSD3B7Q9H2F3 369 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 STK32BQ9NY57 414 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 MTMR4Q9NYA4 1195 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 SERTAD1Q9UHV2 236 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 SERPINB13Q9UIV8 391 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 MAN1B1Q9UKM7 699 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 PCDHA5Q9Y5H7 936 aa5.43□□□□□ -1.54
PDLIM5-214ENST00000510099 MYH6P13533 1939 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 CCDC194A0A1B0GVG4 234 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 VWA3AA6NCI4 1184 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 USP17L5A8MUK1 530 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 H0YIN7 160 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 ECE2O60344 883 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NEMFO60524 1076 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SMC2O95347 1197 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 TTLL1O95922 423 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SLFN14P0C7P3 912 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 GOLGA8HP0CJ92 632 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 LONP1P36776 959 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PRPHP41219 470 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SCNN1DP51172 638 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NAPAP54920 295 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 GSDMDP57764 484 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NFIAQ12857 509 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 DPYDQ12882 1025 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PTGDRQ13258 359 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 ORC2Q13416 577 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NOLC1Q14978 699 aaKnown RBP eCLIP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 ZNF174Q15697 407 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 IL17AQ16552 155 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 CT47A1Q5JQC4 288 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 CC2D2BQ6DHV5 1058 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PPP1R18Q6NYC8 613 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 KRT25Q7Z3Z0 450 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PLPP6Q8IY26 295 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 DRC7Q8IY82 874 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 GRAMD1CQ8IYS0 662 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 C17orf53Q8N3J3 647 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 MLKLQ8NB16 471 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 RASGRP4Q8TDF6 673 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PTCD2Q8WV60 388 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SMARCE1Q969G3 411 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 ZNF622Q969S3 477 aaKnown RBP eCLIP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 RRP36Q96EU6 259 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 EPSTI1Q96J88 318 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NAP1L5Q96NT1 182 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 IDI2Q9BXS1 227 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 RIOX1Q9H6W3 641 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 DNAJC18Q9H819 358 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 DBNDD1Q9H9R9 158 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 USP40Q9NVE5 1235 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 IMPACTQ9P2X3 320 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 RGS17Q9UGC6 210 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SEC63Q9UGP8 760 aaKnown RBP5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 NRBP1Q9UHY1 535 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 DACH1Q9UI36 760 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SERPINA10Q9UK55 444 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PCDHA6Q9UN73 950 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 VPS9D1Q9Y2B5 631 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 PCDHA8Q9Y5H6 950 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 MYH1P12882 1939 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 ATRNL1Q5VV63 1379 aa5.42□□□□□ -1.54
PDLIM5-214ENST00000510099 SIPA1L1O43166 1804 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 LAD1O00515 517 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CBFA2T2O43439 604 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 TBC1D12O60347 775 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 RGS20O76081 388 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 TPM2P07951 284 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 ATP1A3P13637 1013 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 ZNF18P17022 549 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 ERCC5P28715 1186 aaPredicted RBP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 GNA11P29992 359 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CHRNA5P30532 468 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 MCM7P33993 719 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CCZ1BP86790 482 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CCZ1P86791 482 aaPredicted RBP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 FANCCQ00597 558 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 FMR1Q06787 632 aaKnown RBP eCLIP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 ZNF543Q08ER8 600 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 LRMPQ12912 555 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 DHX8Q14562 1220 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 NONOQ15233 471 aaKnown RBP eCLIP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 EZH2Q15910 746 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 INF2Q27J81 1249 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 PDXDC2PQ6P474 469 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 USP17L2Q6R6M4 530 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 POTEAQ6S8J7 498 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CLEC10AQ8IUN9 316 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 PDILTQ8N807 584 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CCDC150Q8NCX0 1101 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 SUPT20HQ8NEM7 779 aa5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 ENOX1Q8TC92 643 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-214ENST00000510099 CACTINQ8WUQ7 758 aaKnown RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms