RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 AGBL1Q96MI9 1066 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 TOX2Q96NM4 488 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 STARD7Q9NQZ5 370 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 IL17RBQ9NRM6 502 aa19■□□□□ 0.63
RAB40C-202ENST00000509637 CDH23Q9H251 3354 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 PLIN4Q96Q06 1357 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 GRXCR1A8MXD5 290 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 NMT2O60551 498 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 ZBED4O75132 1171 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 ASGR1P07306 291 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 CST5P28325 142 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 TDO2P48775 406 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 TFAP4Q01664 338 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 GRIN2CQ14957 1233 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 CCDC144CPQ8IYA2 1237 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 USP38Q8NB14 1042 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 MAFAQ8NHW3 353 aaPredicted RBP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 RNPC3Q96LT9 517 aaKnown RBP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 PURBQ96QR8 312 aaKnown RBP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 CHMP4BQ9H444 224 aaKnown RBP18.99■□□□□ 0.63
RAB40C-202ENST00000509637 FEM1BQ9UK73 627 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.99■□□□□ 0.634e-6■■■□□ 15.8
RAB40C-202ENST00000509637 SALL3Q9BXA9 1300 aa18.99■□□□□ 0.63
RAB40C-202ENST00000509637 LCTP09848 1927 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 TMEM232C9JQI7 657 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 TTLL1O95922 423 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 APPP05067 770 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 GJA9P57773 515 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 BEX3Q00994 111 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 CTDSPL2Q05D32 466 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 GRIN2DO15399 1336 aa18.98■□□□□ 0.63
RAB40C-202ENST00000509637 TIMP1P01033 207 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-202ENST00000509637 BMP3P12645 472 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 MCCP23508 829 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 PBX2P40425 430 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 NKX3-2P78367 333 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 FPGSQ05932 587 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 PPARAQ07869 468 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 MUM1L1Q5H9M0 696 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 VPS53Q5VIR6 699 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 CHST13Q8NET6 341 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 VWCEQ96DN2 955 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
RAB40C-202ENST00000509637 PDGFCQ9NRA1 345 aa18.97■□□□□ 0.63
RAB40C-202ENST00000509637 MOXD2PA6NHM9 499 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 C6orf222P0C671 652 aaPredicted RBP18.96■□□□□ 0.63
RAB40C-202ENST00000509637 GNAT2P19087 354 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 RASIP1Q5U651 963 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 KCTD1Q719H9 257 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 FAM126BQ8IXS8 530 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 ANKRD35Q8N283 1001 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 ABHD16BQ9H3Z7 469 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 GNEQ9Y223 722 aaKnown RBP18.96■□□□□ 0.63
RAB40C-202ENST00000509637 ELP1O95163 1332 aa18.96■□□□□ 0.63
RAB40C-202ENST00000509637 DCDC2CA8MYV0 355 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 RBAK-RBAKDNI3L0D1 243 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 ARVCFO00192 962 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 ACRP10323 421 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 OAZ1P54368 228 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 PRDM6Q9NQX0 595 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 UMODL1Q5DID0 1318 aa18.95■□□□□ 0.62
RAB40C-202ENST00000509637 MYO9BQ13459 2157 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 CD4P01730 458 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 TSPY3P0CV98 308 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 TSPY8P0CW00 308 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 CSF2RAP15509 400 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 DNAJB2P25686 324 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 NOVP48745 357 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 GNASQ5JWF2 1037 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 TTBK2Q6IQ55 1244 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 TAPT1Q6NXT6 567 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 SLC43A3Q8NBI5 491 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 STAG1Q8WVM7 1258 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 GMCL1Q96IK5 515 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 RNF146Q9NTX7 359 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 SYNPO2Q9UMS6 1093 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 VCANP13611 3396 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 TTC41PQ6P2S7 1318 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 LRRC37A2A6NM11 1700 aa18.94■□□□□ 0.62
RAB40C-202ENST00000509637 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.93■□□□□ 0.62
RAB40C-202ENST00000509637 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.93■□□□□ 0.62
RAB40C-202ENST00000509637 SMPD1P17405 629 aa18.93■□□□□ 0.62
RAB40C-202ENST00000509637 CXCL17Q6UXB2 119 aa18.93■□□□□ 0.62
RAB40C-202ENST00000509637 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
RAB40C-202ENST00000509637 FBXO40Q9UH90 709 aa18.93■□□□□ 0.62
RAB40C-202ENST00000509637 PRR12Q9ULL5 1215 aa18.93■□□□□ 0.62
RAB40C-202ENST00000509637 FOSL2P15408 326 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 CYP2C18P33260 490 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 RCSD1Q6JBY9 416 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 GPATCH3Q96I76 525 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 GLT1D1Q96MS3 346 aa18.92■□□□□ 0.62
RAB40C-202ENST00000509637 TRERF1Q96PN7 1200 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms