RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 LARP6Q9BRS8 491 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 GPHNQ9NQX3 736 aaPredicted RBP18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 IL17RBQ9NRM6 502 aa18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 SLC12A7Q9Y666 1083 aa18.82■□□□□ 0.6
NDFIP1-204ENST00000509436 IGKV6D-41A0A0C4DH26 115 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 CAP2P40123 477 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 EVCP57679 992 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 CATIPQ7Z7H3 387 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 CCDC84Q86UT8 332 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 CHMP4CQ96CF2 233 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 ZNF274Q96GC6 653 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 CEP95Q96GE4 821 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 ASCC2Q9H1I8 757 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 KAT14Q9H8E8 782 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 KANSL2Q9H9L4 492 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 STX8Q9UNK0 236 aa18.81■□□□□ 0.6
NDFIP1-204ENST00000509436 TTLL1O95922 423 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 GH2P01242 217 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 HSP90AA1P07900 732 aaKnown RBP18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 ASNSP08243 561 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 RAB3GAP1Q15042 981 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 CCL14Q16627 93 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 SLKQ9H2G2 1235 aaPredicted RBP18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 MTMR4Q9NYA4 1195 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 ZBTB21Q9ULJ3 1066 aa18.8■□□□□ 0.6
NDFIP1-204ENST00000509436 GOLGA8BA8MQT2 603 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 DNM1LO00429 736 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 ZBTB43O43298 467 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 TOP1P11387 765 aaKnown RBP18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 RCAN1P53805 252 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 MRPS5P82675 430 aaKnown RBP18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 ICA1Q05084 483 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 PABPC4Q13310 644 aaKnown RBP eCLIP18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 RRP1BQ14684 758 aaKnown RBP18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 SEPT2Q15019 361 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 ME3Q16798 604 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 RCSD1Q6JBY9 416 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 APOA5Q6Q788 366 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 ZNF654Q8IZM8 581 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 SENP2Q9HC62 589 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 HCN4Q9Y3Q4 1203 aa18.79■□□□□ 0.6
NDFIP1-204ENST00000509436 PFKFB2O60825 505 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 DDAH1O94760 285 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 CALM1P0DP23 149 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 CALM2P0DP24 149 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 CALM3P0DP25 149 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 PDIA3P30101 505 aaKnown RBP18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 NOVP48745 357 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 TMEM47Q9BQJ4 181 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 ATP11BQ9Y2G3 1177 aa18.78■□□□□ 0.6
NDFIP1-204ENST00000509436 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 METAP2P50579 478 aaKnown RBP eCLIP18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 ATP2B2Q01814 1243 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 STK3Q13188 491 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 SNX17Q15036 470 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 MORN1Q5T089 497 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 MICU3Q86XE3 530 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 LPAR1Q92633 364 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 SNX27Q96L92 541 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 ARHGEF10LQ9HCE6 1279 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 CLIP2Q9UDT6 1046 aa18.77■□□□□ 0.6
NDFIP1-204ENST00000509436 MYH6P13533 1939 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 GOLGA8AA7E2F4 631 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 DHX16O60231 1041 aaKnown RBP18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 LARGE1O95461 756 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 DNAJB2P25686 324 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 RGS2P41220 211 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 SPP2Q13103 211 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 SH3D19Q5HYK7 790 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 POTEEQ6S8J3 1075 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 NUP133Q8WUM0 1156 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 GTF3C6Q969F1 213 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 APBA2Q99767 749 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 LRFN3Q9BTN0 628 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 ZNF576Q9H609 170 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 TXNRD2Q9NNW7 524 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 PDLIM7Q9NR12 457 aa18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 DDX20Q9UHI6 824 aaKnown RBP18.76■□□□□ 0.59
NDFIP1-204ENST00000509436 PEX10O60683 326 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 EEF2P13639 858 aaKnown RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 MAPK4P31152 587 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 HMGCS2P54868 508 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 CCT2P78371 535 aaKnown RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 CUL4AQ13619 759 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 PPP2R5BQ15173 497 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 SHROOM1Q2M3G4 852 aaPredicted RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 SLC39A5Q6ZMH5 540 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 CLEC10AQ8IUN9 316 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 CCDC83Q8IWF9 413 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 NECAB1Q8N987 351 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 ZNF280CQ8ND82 737 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 RNPC3Q96LT9 517 aaKnown RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 SH2D4AQ9H788 454 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms