RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 KCNMB3Q9NPA1 279 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 PANK4Q9NVE7 773 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 WDR35Q9P2L0 1181 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 ASB3Q9Y575 518 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
PDGFRA-207ENST00000509092 DPPA5A6NC42 116 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 VIMP08670 466 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 TPP2P29144 1249 aaPredicted RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 CDC37Q16543 378 aaPredicted RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 IFI16Q16666 785 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 AMOTQ4VCS5 1084 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 BEND3Q5T5X7 828 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 CCDC129Q6ZRS4 1044 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 FAM167BQ9BTA0 163 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 PRLRP16471 622 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 DRD4P21917 467 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 CUL4BQ13620 913 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 CCDC96Q2M329 555 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 C8orf74Q6P047 294 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 LRIG3Q6UXM1 1119 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 SPATA20Q8TB22 786 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 TRIM4Q9C037 500 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 PHAXQ9H814 394 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 GDF3Q9NR23 364 aa11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
PDGFRA-207ENST00000509092 N4BP3O15049 544 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 SASH1O94885 1247 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CDC25AP30304 524 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CD151P48509 253 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 DYNC1I2Q13409 638 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 SEPT2Q15019 361 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 KIAA0753Q2KHM9 967 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 MYLK4Q86YV6 388 aaPredicted RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CCDC197Q8NCU1 140 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 RAPGEF5Q92565 580 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 LIMA1Q9UHB6 759 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CEP131Q9UPN4 1083 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 ORC4O43929 436 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 FAM153BP0C7A2 387 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 MRPS35P82673 323 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 TAF11Q15544 211 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 SGSM1Q2NKQ1 1148 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 FAM153CQ494X1 144 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 TBC1D1Q86TI0 1168 aaPredicted RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 WHAMMQ8TF30 809 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 NAF1Q96HR8 494 aaKnown RBP11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 GJB4Q9NTQ9 266 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 FAM153AQ9UHL3 310 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 SERTAD1Q9UHV2 236 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 TFR2Q9UP52 801 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 MRC1P22897 1456 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 CPS1P31327 1500 aa11.1□□□□□ -0.63
PDGFRA-207ENST00000509092 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 E7EWF7 191 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 FOXO3O43524 673 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 FMNL1O95466 1100 aaPredicted RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MYL1P05976 194 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 NQO1P15559 274 aaKnown RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 CCT6AP40227 531 aaKnown RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MRPS25P82663 173 aaKnown RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 PPARAQ07869 468 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 BIRC3Q13489 604 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 SETDB1Q15047 1291 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 KRT31Q15323 416 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 NBPF15Q8N660 670 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 ANKS4BQ8N8V4 417 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 PLAAQ9Y263 795 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 TECPR2O15040 1411 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MYH10P35580 1976 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 GCOM1H8Y6P7 765 aaPredicted RBP11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MAFGO15525 162 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 EVI5O60447 810 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 MYZAPP0CAP1 466 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 STX17P56962 302 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 PPP2R2AP63151 447 aa11.09□□□□□ -0.63
PDGFRA-207ENST00000509092 ITIH4Q14624 930 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms