RNA–Protein interactions for RNA: ENST00000509023.5

SNCAIP-211, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 1,972 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-211ENST00000509023 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
SNCAIP-211ENST00000509023 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-211ENST00000509023 ZBTB48P10074 688 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 MOGSQ13724 837 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 DIS3L2Q8IYB7 885 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 RLFQ13129 1914 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 KIF28PB7ZC32 967 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 ZNF157P51786 506 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 GTF2A2P52657 109 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FSTL1Q12841 308 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 GNL2Q13823 731 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 COG2Q14746 738 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 NPY5RQ15761 445 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 ATG4CQ96DT6 458 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 ZSCAN16Q9H4T2 348 aaPredicted RBP17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 PCDHA1Q9Y5I3 950 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
SNCAIP-211ENST00000509023 BTBD18B2RXH4 712 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 DSG3P32926 999 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 KRT2P35908 639 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 USH1GQ495M9 461 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 OXER1Q8TDS5 423 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 BRMS1Q9HCU9 246 aa17.05■□□□□ 0.32
SNCAIP-211ENST00000509023 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 TMEM88BA6NKF7 163 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 VWA5AO00534 786 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 CALML3P27482 149 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 RGMBQ6NW40 437 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 SPDYE16A6NNV3 312 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 CETPP11597 493 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 NR5A1Q13285 461 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 FOXP1Q9H334 677 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 PCDHA4Q9UN74 947 aa17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 CTDP1Q9Y5B0 961 aaPredicted RBP17.04■□□□□ 0.32
SNCAIP-211ENST00000509023 MYPNQ86TC9 1320 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 CCL15-CCL14A0A0B4J2E2 113 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ADAMTS3O15072 1205 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ZBED4O75132 1171 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 FDX1P10109 184 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 U2AF2P26368 475 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 GNA11P29992 359 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 IRX3P78415 501 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 CCL15Q16663 113 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 GPAT2Q6NUI2 795 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 BLIDQ8IZY5 108 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 C6orf50Q9HD87 102 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ADAMTS5Q9UNA0 930 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ZNF536O15090 1300 aa17.03■□□□□ 0.32
SNCAIP-211ENST00000509023 ICAM1P05362 532 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 ADCY7P51828 1080 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 TRAF1Q13077 416 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 BRAPQ7Z569 592 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 NOSTRINQ8IVI9 506 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 RAVER2Q9HCJ3 691 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-211ENST00000509023 BRI3BPQ8WY22 251 aa17.02■□□□□ 0.31
SNCAIP-211ENST00000509023 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.31
SNCAIP-211ENST00000509023 CCPG1Q9ULG6 757 aa17.02■□□□□ 0.31
SNCAIP-211ENST00000509023 COL11A1P12107 1806 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 BAG4O95429 457 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 REPS2Q8NFH8 660 aa17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 TNFRSF25Q93038 417 aa17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 RIC8AQ9NPQ8 531 aa17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 MYH15Q9Y2K3 1946 aa17.01■□□□□ 0.31
SNCAIP-211ENST00000509023 M0R2N6 131 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 SLC10A3P09131 477 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 OSBPP22059 807 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 DNM1Q05193 864 aaKnown RBP17■□□□□ 0.31
SNCAIP-211ENST00000509023 BICD2Q8TD16 824 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 RASGRP4Q8TDF6 673 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 CUL5Q93034 780 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 GBP4Q96PP9 640 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
SNCAIP-211ENST00000509023 PSTPIP2Q9H939 334 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 PCDHA6Q9UN73 950 aa17■□□□□ 0.31
SNCAIP-211ENST00000509023 PCDHA8Q9Y5H6 950 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms