RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 FEM1BQ9UK73 627 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 RBM8AQ9Y5S9 174 aaKnown RBP10.21□□□□□ -0.77
SNCA-211ENST00000508895 IVNS1ABPQ9Y6Y0 642 aa10.21□□□□□ -0.77
SNCA-211ENST00000508895 VCANP13611 3396 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 SOWAHBA6NEL2 793 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ZNF213O14771 459 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ATP2A1O14983 1001 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 STRNO43815 780 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 SLC25A27O95847 323 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 SNAI1O95863 264 aaPredicted RBP10.2□□□□□ -0.78
SNCA-211ENST00000508895 SNHG28P0DPA3 235 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 TOP1P11387 765 aaKnown RBP10.2□□□□□ -0.78
SNCA-211ENST00000508895 COL6A1P12109 1028 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 FCER1AP12319 257 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ANTXR2P58335 489 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 SEC23AQ15436 765 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 TMEM63BQ5T3F8 832 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 OLFML2BQ68BL8 750 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 CASC1Q6TDU7 716 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 CHST3Q7LGC8 479 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ENAHQ8N8S7 591 aaPredicted RBP10.2□□□□□ -0.78
SNCA-211ENST00000508895 MAP4K1Q92918 833 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 TEX13BQ9BXU2 312 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ISY1Q9ULR0 285 aaKnown RBP10.2□□□□□ -0.78
SNCA-211ENST00000508895 SYNPO2Q9UMS6 1093 aa10.2□□□□□ -0.78
SNCA-211ENST00000508895 ZBED4O75132 1171 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 ZNF865P0CJ78 1059 aaPredicted RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 STAT2P52630 851 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 ZNF543Q08ER8 600 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 IMMTQ16891 758 aaKnown RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 CCDC96Q2M329 555 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 MFSD14CQ5VZR4 134 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 BTNL9Q6UXG8 535 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 ABRAQ8N0Z2 381 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 STAG2Q8N3U4 1231 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 UBA5Q9GZZ9 404 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 KATNBL1Q9H079 304 aa10.19□□□□□ -0.78
SNCA-211ENST00000508895 RANBP17Q9H2T7 1088 aaKnown RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 DDX20Q9UHI6 824 aaKnown RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 COLQQ9Y215 455 aaPredicted RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 U3KPZ7 1027 aaPredicted RBP10.19□□□□□ -0.78
SNCA-211ENST00000508895 LAMA3Q16787 3333 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 MYADML2A6NDP7 307 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 PLA2G6O60733 806 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 CNGA1P29973 690 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 LRRC26Q2I0M4 334 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 GJC2Q5T442 439 aaPredicted RBP10.18□□□□□ -0.78
SNCA-211ENST00000508895 SYDE2Q5VT97 1194 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNCA-211ENST00000508895 TRMT44Q8IYL2 757 aaKnown RBP10.18□□□□□ -0.78
SNCA-211ENST00000508895 DCAF4Q8WV16 495 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 CLEC4DQ8WXI8 215 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 ANKS1AQ92625 1134 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 TINF2Q9BSI4 451 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
SNCA-211ENST00000508895 RNF146Q9NTX7 359 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 CTNNA3Q9UI47 895 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
SNCA-211ENST00000508895 TNKSO95271 1327 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 E7EWF7 191 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 NFIBO00712 420 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 PCP11498 1178 aaKnown RBP10.17□□□□□ -0.78
SNCA-211ENST00000508895 ALAS1P13196 640 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 IKQ13123 557 aaPredicted RBP10.17□□□□□ -0.78
SNCA-211ENST00000508895 KCTD2Q14681 263 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 NECTIN1Q15223 517 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 FAM160B2Q86V87 743 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 FAM133AQ8N9E0 248 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 CHURC1Q8WUH1 139 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 ESR2Q92731 530 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 DPF3Q92784 378 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 ZSCAN10Q96SZ4 725 aaPredicted RBP10.17□□□□□ -0.78
SNCA-211ENST00000508895 PRO3102Q9H379 93 aa10.17□□□□□ -0.78
SNCA-211ENST00000508895 ZMYND8Q9ULU4 1186 aaPredicted RBP10.17□□□□□ -0.78
SNCA-211ENST00000508895 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.16□□□□□ -0.78
SNCA-211ENST00000508895 SLC27A2O14975 620 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 PPP1R11O60927 126 aaPredicted RBP10.16□□□□□ -0.78
SNCA-211ENST00000508895 PGK1P00558 417 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 SYN1P17600 705 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 CREB3L3Q68CJ9 461 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 SLC30A10Q6XR72 485 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 NECAB2Q7Z6G3 386 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 DGKHQ86XP1 1220 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 MB21D2Q8IYB1 491 aaPredicted RBP10.16□□□□□ -0.78
SNCA-211ENST00000508895 C7orf61Q8IZ16 206 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 PNMA1Q8ND90 353 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 TTC14Q96N46 770 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
SNCA-211ENST00000508895 C11orf49Q9H6J7 331 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 PDGFCQ9NRA1 345 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
SNCA-211ENST00000508895 DIS3Q9Y2L1 958 aaKnown RBP10.16□□□□□ -0.78
SNCA-211ENST00000508895 OPLAHO14841 1288 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 CTAGE5O15320 804 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms