RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 MYH4Q9Y623 1939 aa11.92□□□□□ -0.5
UBE2D3-227ENST00000508818 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 NMT2O60551 498 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 HSPD1P10809 573 aaKnown RBP11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 TAL1P17542 331 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 CCDC174Q6PII3 467 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 MFSD6Q6ZSS7 791 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 KCTD1Q719H9 257 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 TDHQ8IZJ6 230 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 ACAD9Q9H845 621 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 PRDM5Q9NQX1 630 aaPredicted RBP11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 IL17RBQ9NRM6 502 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 DIAPH3Q9NSV4 1193 aa11.91□□□□□ -0.5
UBE2D3-227ENST00000508818 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 SYNGAP1Q96PV0 1343 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 POTEB2H3BUK9 544 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 HIP1O00291 1037 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 FOXP2O15409 715 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 PLA2G6O60733 806 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 PGK1P00558 417 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 IGHDP01880 384 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 ZNF865P0CJ78 1059 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 TOP1P11387 765 aaKnown RBP11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 ALAS1P13196 640 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 SDSP20132 328 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 HAND2P61296 217 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 NUCB1Q02818 461 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 TKFCQ3LXA3 575 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 DCAF4Q8WV16 495 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 AGBL1Q96MI9 1066 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 RNF41Q9H4P4 317 aaPredicted RBP11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 SPC25Q9HBM1 224 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 RNF146Q9NTX7 359 aa11.9□□□□□ -0.5
UBE2D3-227ENST00000508818 DNAJC25-GNG10A0A024R161 153 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 ZNF213O14771 459 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 SNAI1O95863 264 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 PCP11498 1178 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 ACVR2BQ13705 512 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 TRIM60Q495X7 471 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 MAMDC4Q6UXC1 1216 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 NOL8Q76FK4 1167 aaKnown RBP11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 PLEKHM2Q8IWE5 1019 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 ABHD16BQ9H3Z7 469 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 PHF24Q9UPV7 400 aa11.89□□□□□ -0.51
UBE2D3-227ENST00000508818 ASB14A6NK59 587 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 SOX1O00570 391 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 FGRP09769 529 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 SNAP25P60880 206 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 TLE2Q04725 743 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 LRIT3Q3SXY7 679 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 ARMCX2Q7L311 632 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 NUP133Q8WUM0 1156 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 ESR2Q92731 530 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 TTC14Q96N46 770 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 TMEM47Q9BQJ4 181 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 TSEN34Q9BSV6 310 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 OSBPL3Q9H4L5 887 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 TCP11L1Q9NUJ3 509 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 CCPG1Q9ULG6 757 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 FRMPD3Q5JV73 1810 aa11.88□□□□□ -0.51
UBE2D3-227ENST00000508818 SMCHD1A6NHR9 2005 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 PLXNA1Q9UIW2 1896 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 DUSP11O75319 330 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 SLC16A2P36021 539 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 CLCN6P51797 869 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 ACLYP53396 1101 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 SYDE2Q5VT97 1194 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 CCDC144CPQ8IYA2 1237 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 PCSK9Q8NBP7 692 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 LENG1Q96BZ8 264 aaPredicted RBP11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 A1CFQ9NQ94 594 aaKnown RBP11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 PNMA2Q9UL42 364 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 TACC3Q9Y6A5 838 aa11.87□□□□□ -0.51
UBE2D3-227ENST00000508818 FRMPD2Q68DX3 1309 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 DCDC2CA8MYV0 355 aa11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 PQBP1O60828 265 aaKnown RBP11.86□□□□□ -0.51
UBE2D3-227ENST00000508818 SNX17Q15036 470 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms