RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 EFCC1Q9HA90 598 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 ISY1Q9ULR0 285 aaKnown RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 CNTNAP5Q8WYK1 1306 aa12.05□□□□□ -0.48
PTPN20-220ENST00000508715 RBBP6Q7Z6E9 1792 aaKnown RBP12.05□□□□□ -0.48
PTPN20-220ENST00000508715 GOLGA8AA7E2F4 631 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 GOLGA8BA8MQT2 603 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 FKTNO75072 461 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CALM1P0DP23 149 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CALM2P0DP24 149 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CALM3P0DP25 149 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 LACTBP83111 547 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 FGD1P98174 961 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 RABEP1Q15276 862 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 RTN1Q16799 776 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 QRICH1Q2TAL8 776 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 NOL8Q76FK4 1167 aaKnown RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 GPRC5AQ8NFJ5 357 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 CTCFLQ8NI51 663 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 GTF3C2Q8WUA4 911 aaPredicted RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 PIGSQ96S52 555 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 SPZ1Q9BXG8 430 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
PTPN20-220ENST00000508715 VAT1LQ9HCJ6 419 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 HTTP42858 3142 aa12.04□□□□□ -0.48
PTPN20-220ENST00000508715 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 PFKFB2O60825 505 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 PPFIA3O75145 1194 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 ERCC3P19447 782 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 STAT3P40763 770 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 METAP2P50579 478 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPN20-220ENST00000508715 SCRN1Q12765 414 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 IKQ13123 557 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-220ENST00000508715 STK3Q13188 491 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 CDC37Q16543 378 aaPredicted RBP12.03□□□□□ -0.48
PTPN20-220ENST00000508715 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 NECAB1Q8N987 351 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 SHISA4Q96DD7 197 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
PTPN20-220ENST00000508715 OPLAHO14841 1288 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 ZBED4O75132 1171 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 ICAM1P05362 532 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 FDX1P10109 184 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 KIF5BP33176 963 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 PSMC4P43686 418 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 OAZ1P54368 228 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 PLS1Q14651 629 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 SNRNP48Q6IEG0 339 aaKnown RBP12.02□□□□□ -0.49
PTPN20-220ENST00000508715 CLEC4DQ8WXI8 215 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 PIBF1Q8WXW3 757 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 USP6NLQ92738 828 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 NAP1L2Q9ULW6 460 aaPredicted RBP12.02□□□□□ -0.49
PTPN20-220ENST00000508715 GABRQQ9UN88 632 aa12.02□□□□□ -0.49
PTPN20-220ENST00000508715 PKN1Q16512 942 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 SYNE3Q6ZMZ3 975 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPN20-220ENST00000508715 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 GPR142Q7Z601 462 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 TBC1D5Q92609 795 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 PHKBQ93100 1093 aa12.01□□□□□ -0.49
PTPN20-220ENST00000508715 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
PTPN20-220ENST00000508715 PNMA6FA0A0J9YX94 578 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 NFIBO00712 420 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 ZBTB5O15062 677 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 ALAS1P13196 640 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 IFNAR1P17181 557 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 GNAQP50148 359 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 ANKRD1Q15327 319 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 MORN1Q5T089 497 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 GTF3C6Q969F1 213 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 COA7Q96BR5 231 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 LZTS2Q9BRK4 669 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 LIMCH1Q9UPQ0 1083 aa12□□□□□ -0.49
PTPN20-220ENST00000508715 V9GY48 417 aaPredicted RBP12□□□□□ -0.49
PTPN20-220ENST00000508715 KIAA0100Q14667 2235 aaKnown RBP12□□□□□ -0.49
PTPN20-220ENST00000508715 ADAMTS3O15072 1205 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 DHX16O60231 1041 aaKnown RBP11.99□□□□□ -0.49
PTPN20-220ENST00000508715 COBLO75128 1261 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 SLC25A27O95847 323 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 IGHA2P01877 340 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 FDPSP14324 419 aaKnown RBP11.99□□□□□ -0.49
PTPN20-220ENST00000508715 PTPREP23469 700 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 MAPK4P31152 587 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 SLC4A3P48751 1232 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 GRB14Q14449 540 aa11.99□□□□□ -0.49
PTPN20-220ENST00000508715 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms