RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FAM160B2Q86V87 743 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 TBC1D10CQ8IV04 446 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 CHST13Q8NET6 341 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 CHURC1Q8WUH1 139 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 FERMT2Q96AC1 680 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 XPNPEP3Q9NQH7 507 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 HOMER2Q9NSB8 354 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 MTMR10Q9NXD2 777 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 PRR12Q9ULL5 1215 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 CTDP1Q9Y5B0 961 aaPredicted RBP19.18■□□□□ 0.66
LMNA-222ENST00000508500 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
LMNA-222ENST00000508500 KBTBD13C9JR72 458 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 ADCY6O43306 1168 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 ADAMTS4O75173 837 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 PGK1P00558 417 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 FDX1P10109 184 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 PDE4AP27815 886 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 MDM2Q00987 491 aaPredicted RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 CNTN2Q02246 1040 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 RRP12Q5JTH9 1297 aaKnown RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 Q7L0L9 218 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 ZNF467Q7Z7K2 595 aaPredicted RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 ANKRD35Q8N283 1001 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 DEFB123Q8N688 67 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 TMEM47Q9BQJ4 181 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 UBE2OQ9C0C9 1292 aaKnown RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 TCP11L1Q9NUJ3 509 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 ISY1Q9ULR0 285 aaKnown RBP19.17■□□□□ 0.66
LMNA-222ENST00000508500 MTMR7Q9Y216 660 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 UNC80Q8N2C7 3258 aa19.17■□□□□ 0.66
LMNA-222ENST00000508500 RARBP10826 455 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 AKR1A1P14550 325 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 IRX5P78411 483 aaPredicted RBP19.16■□□□□ 0.66
LMNA-222ENST00000508500 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 FAM133AQ8N9E0 248 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 SLC17A8Q8NDX2 589 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 KATNBL1Q9H079 304 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 IL25Q9H293 177 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 A1CFQ9NQ94 594 aaKnown RBP19.16■□□□□ 0.66
LMNA-222ENST00000508500 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 FBXO40Q9UH90 709 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 PHF24Q9UPV7 400 aa19.16■□□□□ 0.66
LMNA-222ENST00000508500 SOWAHBA6NEL2 793 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 IKQ13123 557 aaPredicted RBP19.15■□□□□ 0.66
LMNA-222ENST00000508500 TRIM60Q495X7 471 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 MUM1L1Q5H9M0 696 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 AKNAD1Q5T1N1 836 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 CWC27Q6UX04 472 aaKnown RBP19.15■□□□□ 0.66
LMNA-222ENST00000508500 ACAD9Q9H845 621 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 RNF146Q9NTX7 359 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.15■□□□□ 0.66
LMNA-222ENST00000508500 CNPY2Q9Y2B0 182 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 ATP11BQ9Y2G3 1177 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 STXBP5LQ9Y2K9 1186 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 ASTN1O14525 1302 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 NEDD4P46934 1319 aa19.15■□□□□ 0.66
LMNA-222ENST00000508500 MYADML2A6NDP7 307 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 TOP1P11387 765 aaKnown RBP19.14■□□□□ 0.65
LMNA-222ENST00000508500 SLC16A2P36021 539 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 ACVR2BQ13705 512 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 CCSAPQ6IQ19 270 aaPredicted RBP19.14■□□□□ 0.65
LMNA-222ENST00000508500 BTNL9Q6UXG8 535 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 KLHDC9Q8NEP7 349 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 DCAF4Q8WV16 495 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 TRERF1Q96PN7 1200 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 ZHX1Q9UKY1 873 aaPredicted RBP19.14■□□□□ 0.65
LMNA-222ENST00000508500 DDX49Q9Y6V7 483 aaKnown RBP19.14■□□□□ 0.65
LMNA-222ENST00000508500 SYNRGQ9UMZ2 1314 aa19.14■□□□□ 0.65
LMNA-222ENST00000508500 CUL9Q8IWT3 2517 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 POTEB2H3BUK9 544 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 ALAS1P13196 640 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 IRX6P78412 446 aaPredicted RBP19.13■□□□□ 0.65
LMNA-222ENST00000508500 C1orf53Q5VUE5 145 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 MFSD6Q6ZSS7 791 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 ARMCX2Q7L311 632 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 SH3RF1Q7Z6J0 888 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 CCDC144CPQ8IYA2 1237 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 RANBP17Q9H2T7 1088 aaKnown RBP19.13■□□□□ 0.65
LMNA-222ENST00000508500 FAM184BQ9ULE4 1060 aa19.13■□□□□ 0.65
LMNA-222ENST00000508500 FRMPD2Q68DX3 1309 aaPredicted RBP19.13■□□□□ 0.65
LMNA-222ENST00000508500 EYSQ5T1H1 3165 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 DLL1O00548 723 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 PDHBP11177 359 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 GSPT1P15170 499 aaKnown RBP19.12■□□□□ 0.65
LMNA-222ENST00000508500 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 RNF180Q86T96 592 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 PURBQ96QR8 312 aaKnown RBP19.12■□□□□ 0.65
LMNA-222ENST00000508500 ZKSCAN3Q9BRR0 538 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 GPCPD1Q9NPB8 672 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 PDLIM7Q9NR12 457 aa19.12■□□□□ 0.65
LMNA-222ENST00000508500 A0A1W2PQ45 241 aaPredicted RBP19.11■□□□□ 0.65
LMNA-222ENST00000508500 A0A1W2PQY0 241 aa19.11■□□□□ 0.65
LMNA-222ENST00000508500 TRIM43BA6NCK2 446 aa19.11■□□□□ 0.65
LMNA-222ENST00000508500 SNHG28P0DPA3 235 aa19.11■□□□□ 0.65
LMNA-222ENST00000508500 CCDC144BQ3MJ40 725 aa19.11■□□□□ 0.65
LMNA-222ENST00000508500 FAM109BQ6ICB4 259 aaPredicted RBP19.11■□□□□ 0.65
LMNA-222ENST00000508500 TRIM43Q96BQ3 446 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms