RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 CYTH3O43739 400 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 ADD1P35611 737 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 HMGN5P82970 282 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 TRAF1Q13077 416 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 CCL15Q16663 113 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 FAM83BQ5T0W9 1011 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 STAG2Q8N3U4 1231 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 SRBD1Q8N5C6 995 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 PDCD7Q8N8D1 485 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 BRI3BPQ8WY22 251 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 MYL10Q9BUA6 226 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 RANBP17Q9H2T7 1088 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 PPP1R9AQ9ULJ8 1098 aa10.03□□□□□ -0.8
USP46-207ENST00000508499 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
USP46-207ENST00000508499 TMEM232C9JQI7 657 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 CTDNEP1O95476 244 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 ANP32AP39687 249 aaKnown RBP10.02□□□□□ -0.81
USP46-207ENST00000508499 TREML2Q5T2D2 321 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 OTUD7BQ6GQQ9 843 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 KCTD1Q719H9 257 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP46-207ENST00000508499 SPICE1Q8N0Z3 855 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 NSUN7Q8NE18 718 aaKnown RBP10.02□□□□□ -0.81
USP46-207ENST00000508499 CAPNS2Q96L46 248 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 PTPN18Q99952 460 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 SLC38A10Q9HBR0 1119 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 PRR12Q9ULL5 1215 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 MGAMO43451 1857 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 ZNF236Q9UL36 1845 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 SMCHD1A6NHR9 2005 aa10.02□□□□□ -0.81
USP46-207ENST00000508499 ADGRA2Q96PE1 1338 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 BTBD19C9JJ37 291 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 CPLX1O14810 134 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 ZBTB5O15062 677 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 DEXIO95424 95 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 RXRAP19793 462 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 OSBPP22059 807 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 GCLCP48506 637 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 CCT2P78371 535 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 CCDC96Q2M329 555 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 SLC35G1Q2M3R5 365 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 SYDE2Q5VT97 1194 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 RASGRP2Q7LDG7 609 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 ZNF467Q7Z7K2 595 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 ADGRF4Q8IZF3 695 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 REPS2Q8NFH8 660 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 PARK7Q99497 189 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 NUP88Q99567 741 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 NCOA5Q9HCD5 579 aaKnown RBP10.01□□□□□ -0.81
USP46-207ENST00000508499 SH3GLB2Q9NR46 395 aa10.01□□□□□ -0.81
USP46-207ENST00000508499 FRMPD2Q68DX3 1309 aaPredicted RBP10□□□□□ -0.81
USP46-207ENST00000508499 ZNFX1Q9P2E3 1918 aaKnown RBP10□□□□□ -0.81
USP46-207ENST00000508499 PNMA6FA0A0J9YX94 578 aa10□□□□□ -0.81
USP46-207ENST00000508499 PDHXO00330 501 aa10□□□□□ -0.81
USP46-207ENST00000508499 VWA5AO00534 786 aa10□□□□□ -0.81
USP46-207ENST00000508499 FLOT1O75955 427 aa10□□□□□ -0.81
USP46-207ENST00000508499 ICAM1P05362 532 aa10□□□□□ -0.81
USP46-207ENST00000508499 GOLGA8HP0CJ92 632 aa10□□□□□ -0.81
USP46-207ENST00000508499 GHRHRQ02643 423 aa10□□□□□ -0.81
USP46-207ENST00000508499 DGKZQ13574 1117 aa10□□□□□ -0.81
USP46-207ENST00000508499 PFKFB3Q16875 520 aaPredicted RBP10□□□□□ -0.81
USP46-207ENST00000508499 NOM1Q5C9Z4 860 aaKnown RBP10□□□□□ -0.81
USP46-207ENST00000508499 TTBK2Q6IQ55 1244 aa10□□□□□ -0.81
USP46-207ENST00000508499 CYP4F22Q6NT55 531 aa10□□□□□ -0.81
USP46-207ENST00000508499 GADL1Q6ZQY3 521 aa10□□□□□ -0.81
USP46-207ENST00000508499 SAMD3Q8N6K7 520 aa10□□□□□ -0.81
USP46-207ENST00000508499 WASF1Q92558 559 aa10□□□□□ -0.81
USP46-207ENST00000508499 RRP36Q96EU6 259 aaKnown RBP10□□□□□ -0.81
USP46-207ENST00000508499 LARP6Q9BRS8 491 aaKnown RBP10□□□□□ -0.81
USP46-207ENST00000508499 TANGO6Q9C0B7 1094 aa10□□□□□ -0.81
USP46-207ENST00000508499 GPCPD1Q9NPB8 672 aa10□□□□□ -0.81
USP46-207ENST00000508499 MORF4L1Q9UBU8 362 aa10□□□□□ -0.81
USP46-207ENST00000508499 ZNF214Q9UL59 606 aaPredicted RBP10□□□□□ -0.81
USP46-207ENST00000508499 RABGAP1Q9Y3P9 1069 aa10□□□□□ -0.81
USP46-207ENST00000508499 KIF3AQ9Y496 699 aa10□□□□□ -0.81
USP46-207ENST00000508499 ZNF536O15090 1300 aa10□□□□□ -0.81
USP46-207ENST00000508499 ESYT2A0FGR8 921 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
USP46-207ENST00000508499 FDPSP14324 419 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 COPB2P35606 906 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 VEGFBP49765 207 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 HERVK_113P62684 666 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 IRX3P78415 501 aaPredicted RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 KIF23Q02241 960 aaPredicted RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 SSRP1Q08945 709 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 STK3Q13188 491 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms