RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FAM160B2Q86V87 743 aa15.41■□□□□ 0.06
HMGCS1-205ENST00000508319 FERMT2Q96AC1 680 aa15.41■□□□□ 0.06
HMGCS1-205ENST00000508319 HOMER2Q9NSB8 354 aa15.41■□□□□ 0.06
HMGCS1-205ENST00000508319 FBXO40Q9UH90 709 aa15.41■□□□□ 0.06
HMGCS1-205ENST00000508319 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
HMGCS1-205ENST00000508319 RANBP6O60518 1105 aaKnown RBP15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 PLA2G6O60733 806 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 FGAP02671 866 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 FDX1P10109 184 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 HSPD1P10809 573 aaKnown RBP15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 GPR153Q6NV75 609 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 RNF180Q86T96 592 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 ANKRD35Q8N283 1001 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 CHURC1Q8WUH1 139 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 CHMP4CQ96CF2 233 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 CCDC171Q6TFL3 1326 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 SYNRGQ9UMZ2 1314 aa15.4■□□□□ 0.06
HMGCS1-205ENST00000508319 ADCY6O43306 1168 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 IKQ13123 557 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 B4GALNT3Q6L9W6 998 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 POTEHQ6S545 545 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 LBHD1Q9BQE6 289 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 RWDD1Q9H446 243 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 ACAD9Q9H845 621 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 PDLIM7Q9NR12 457 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 PRKAG2Q9UGJ0 569 aa15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 ZHX1Q9UKY1 873 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-205ENST00000508319 A0A1W2PQ45 241 aaPredicted RBP15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 A0A1W2PQY0 241 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 IGHDP01880 384 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 RCSD1Q6JBY9 416 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 ARMCX2Q7L311 632 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 PLEKHM2Q8IWE5 1019 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 FAM133AQ8N9E0 248 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 EXOC6Q8TAG9 804 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 A1CFQ9NQ94 594 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 PRDM5Q9NQX1 630 aaPredicted RBP15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 RNF146Q9NTX7 359 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 FAM184BQ9ULE4 1060 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 PRR12Q9ULL5 1215 aa15.38■□□□□ 0.05
HMGCS1-205ENST00000508319 TRIM6-TRIM34B2RNG4 842 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 HAND2P61296 217 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 CNTN2Q02246 1040 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 NUCB1Q02818 461 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 TLE2Q04725 743 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 ACVR2BQ13705 512 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 TKFCQ3LXA3 575 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 RRP12Q5JTH9 1297 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 CCSAPQ6IQ19 270 aaPredicted RBP15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 SH3RF1Q7Z6J0 888 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 CCDC144CPQ8IYA2 1237 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 KLHDC9Q8NEP7 349 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 DCAF4Q8WV16 495 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 RILPL2Q969X0 211 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 KATNBL1Q9H079 304 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 ABHD16BQ9H3Z7 469 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 TOMM22Q9NS69 142 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 MTMR7Q9Y216 660 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 CDH23Q9H251 3354 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 ASTN1O14525 1302 aa15.37■□□□□ 0.05
HMGCS1-205ENST00000508319 TRIM43BA6NCK2 446 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 MYADML2A6NDP7 307 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 DUSP11O75319 330 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 ALAS1P13196 640 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 CST5P28325 142 aaPredicted RBP15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 SNAP25P60880 206 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 CCDC174Q6PII3 467 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 Q7L0L9 218 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 TBC1D10CQ8IV04 446 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 TRIM43Q96BQ3 446 aaPredicted RBP15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 TMEM47Q9BQJ4 181 aa15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 TSEN34Q9BSV6 310 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-205ENST00000508319 MOXD2PA6NHM9 499 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 POTEB2H3BUK9 544 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 SDSP20132 328 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 ACLYP53396 1101 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 IRX5P78411 483 aaPredicted RBP15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 CCDC144BQ3MJ40 725 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 MUM1L1Q5H9M0 696 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 BTNL9Q6UXG8 535 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 DEFB123Q8N688 67 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 BADQ92934 168 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 TRERF1Q96PN7 1200 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 UPF3AQ9H1J1 476 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 RANBP17Q9H2T7 1088 aaKnown RBP15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 TCP11L1Q9NUJ3 509 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 NEDD4P46934 1319 aa15.35■□□□□ 0.05
HMGCS1-205ENST00000508319 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 ICAM1P05362 532 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 CLTBP09497 229 aa15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 PCP11498 1178 aaKnown RBP15.34■□□□□ 0.05
HMGCS1-205ENST00000508319 ITGB8P26012 769 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms