RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 REXO1Q8N1G1 1221 aaKnown RBP20.01■□□□□ 0.79
SFXN1-208ENST00000507823 DISC1Q9NRI5 854 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 UBASH3AP57075 661 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 DPF2Q92785 391 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 PSMD1Q99460 953 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 VAT1LQ9HCJ6 419 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 NFE2L3Q9Y4A8 694 aa20.01■□□□□ 0.79
SFXN1-208ENST00000507823 ARFGEF1Q9Y6D6 1849 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 KCNJ6P48051 423 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 NAALADL2Q58DX5 795 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 ADGRF4Q8IZF3 695 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 PRIMPOLQ96LW4 560 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 PPP1R3GB7ZBB8 358 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 MYL1P05976 194 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 OR52Z1P0C646 297 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
SFXN1-208ENST00000507823 VSTM4Q8IW00 320 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 DCAF4Q8WV16 495 aa20■□□□□ 0.79
SFXN1-208ENST00000507823 CLK2P49760 499 aaKnown RBP19.99■□□□□ 0.79
SFXN1-208ENST00000507823 TMC6Q7Z403 805 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 RIC8AQ9NPQ8 531 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 INTS13Q9NVM9 706 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 CD44P16070 742 aaKnown RBP19.99■□□□□ 0.79
SFXN1-208ENST00000507823 ADCY7P51828 1080 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 ARMCX5Q6P1M9 558 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 CUEDC2Q9H467 287 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 MAGEF1Q9HAY2 307 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 GPCPD1Q9NPB8 672 aa19.99■□□□□ 0.79
SFXN1-208ENST00000507823 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
SFXN1-208ENST00000507823 PPIP5K2O43314 1243 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 EDIL3O43854 480 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 PPP1R11O60927 126 aaPredicted RBP19.98■□□□□ 0.79
SFXN1-208ENST00000507823 SERPINC1P01008 464 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 SKILP12757 684 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 CACNB3P54284 484 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 CERKLQ49MI3 558 aaPredicted RBP19.98■□□□□ 0.79
SFXN1-208ENST00000507823 CCDC93Q567U6 631 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 SPATA1Q5VX52 437 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 TBCKQ8TEA7 893 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 VPS33BQ9H267 617 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 CASP1P29466 404 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 GMLQ99445 158 aa19.98■□□□□ 0.79
SFXN1-208ENST00000507823 ZBTB5O15062 677 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
SFXN1-208ENST00000507823 TCP10Q12799 353 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 CFAP100Q494V2 611 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 TTLL6Q8N841 843 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 MTMR9Q96QG7 549 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 KBTBD4Q9NVX7 518 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 RMND1Q9NWS8 449 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 SYNPO2Q9UMS6 1093 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 MPHOSPH10O00566 681 aaKnown RBP19.97■□□□□ 0.79
SFXN1-208ENST00000507823 C21orf2O43822 256 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 STAT6P42226 847 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 KARSQ15046 597 aaKnown RBP19.97■□□□□ 0.79
SFXN1-208ENST00000507823 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 TTBK2Q6IQ55 1244 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 SLC16A10Q8TF71 515 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 COA7Q96BR5 231 aa19.97■□□□□ 0.79
SFXN1-208ENST00000507823 CCNT1O60563 726 aaKnown RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 SLURP2P0DP57 97 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 EEF2P13639 858 aaKnown RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 KCNA3P22001 575 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 LETM2Q2VYF4 491 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 APTXQ7Z2E3 356 aaKnown RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 IGSF22Q8N9C0 903 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 BIN2Q9UBW5 565 aaPredicted RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 VIL1P09327 827 aaKnown RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 UBA7P41226 1012 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 TBX2Q13207 712 aaPredicted RBP19.96■□□□□ 0.79
SFXN1-208ENST00000507823 KCNB1Q14721 858 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 GMCL1P1Q8NEA9 526 aa19.96■□□□□ 0.79
SFXN1-208ENST00000507823 ZNF658Q5TYW1 1059 aaPredicted RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 JAKMIP3Q5VZ66 844 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 RRAGBQ5VZM2 374 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 RSBN1LQ6PCB5 846 aaPredicted RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 TRMT44Q8IYL2 757 aaKnown RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 PRMT6Q96LA8 375 aaPredicted RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 TDRD3Q9H7E2 651 aaKnown RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 TMEM260Q9NX78 707 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 COL4A5P29400 1685 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 RPN1P04843 607 aaKnown RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 CDC25AP30304 524 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 DNTTIP2Q5QJE6 756 aaKnown RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 PDGFDQ9GZP0 370 aaPredicted RBP19.95■□□□□ 0.78
SFXN1-208ENST00000507823 GLT8D2Q9H1C3 349 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 TMX1Q9H3N1 280 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 SYNRGQ9UMZ2 1314 aa19.95■□□□□ 0.78
SFXN1-208ENST00000507823 A0A1B0GTH6 734 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 PP2D1A8MPX8 630 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 SFPQP23246 707 aaKnown RBP eCLIP19.94■□□□□ 0.78
SFXN1-208ENST00000507823 FXR2P51116 673 aaKnown RBP eCLIP19.94■□□□□ 0.78
SFXN1-208ENST00000507823 PPP4R3AQ6IN85 833 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 GMCL1Q96IK5 515 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 BLZF1Q9H2G9 400 aa19.94■□□□□ 0.78
SFXN1-208ENST00000507823 SAMSN1Q9NSI8 373 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms