RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 MAML3Q96JK9 1138 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 TRERF1Q96PN7 1200 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 RNF146Q9NTX7 359 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
COL1A1-211ENST00000507689 ICAM1P05362 532 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 WTAPQ15007 396 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 SKAP1Q86WV1 359 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 AGBL1Q96MI9 1066 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 FLRT1Q9NZU1 646 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 RIPK3Q9Y572 518 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 COL11A1P12107 1806 aaPredicted RBP18.28■□□□□ 0.52
COL1A1-211ENST00000507689 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
COL1A1-211ENST00000507689 PFASO15067 1338 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
COL1A1-211ENST00000507689 TTBK2Q6IQ55 1244 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 MSL3Q8N5Y2 521 aaKnown RBP18.27■□□□□ 0.52
COL1A1-211ENST00000507689 DPF3Q92784 378 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 SHISA4Q96DD7 197 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 TINF2Q9BSI4 451 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 RANBP17Q9H2T7 1088 aaKnown RBP18.27■□□□□ 0.52
COL1A1-211ENST00000507689 DDX20Q9UHI6 824 aaKnown RBP18.27■□□□□ 0.52
COL1A1-211ENST00000507689 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
COL1A1-211ENST00000507689 KIAA0100Q14667 2235 aaKnown RBP18.26■□□□□ 0.51
COL1A1-211ENST00000507689 POTEB2H3BUK9 544 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 SNHG28P0DPA3 235 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 SNAP25P60880 206 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 ZNF792Q3KQV3 632 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 TMEM67Q5HYA8 995 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
COL1A1-211ENST00000507689 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
COL1A1-211ENST00000507689 GOLGA8HP0CJ92 632 aa18.25■□□□□ 0.51
COL1A1-211ENST00000507689 MCM5P33992 734 aa18.25■□□□□ 0.51
COL1A1-211ENST00000507689 NSMFQ6X4W1 530 aa18.25■□□□□ 0.51
COL1A1-211ENST00000507689 NFXL1Q6ZNB6 911 aa18.25■□□□□ 0.51
COL1A1-211ENST00000507689 CYB5R4Q7L1T6 521 aa18.25■□□□□ 0.51
COL1A1-211ENST00000507689 MPHOSPH6Q99547 160 aaKnown RBP18.25■□□□□ 0.51
COL1A1-211ENST00000507689 SLC27A2O14975 620 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 SEPT4O43236 478 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 CYBAP13498 195 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 TRAF1Q13077 416 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 CREB3L3Q68CJ9 461 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
COL1A1-211ENST00000507689 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
COL1A1-211ENST00000507689 TMTC2Q8N394 836 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 ARRDC4Q8NCT1 418 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 HTTP42858 3142 aa18.24■□□□□ 0.51
COL1A1-211ENST00000507689 ZNF536O15090 1300 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 SYNGAP1Q96PV0 1343 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 REC8O95072 547 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 MYCNP04198 464 aaPredicted RBP18.23■□□□□ 0.51
COL1A1-211ENST00000507689 KRT32Q14532 448 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
COL1A1-211ENST00000507689 PAWRQ96IZ0 340 aaKnown RBP18.23■□□□□ 0.51
COL1A1-211ENST00000507689 MTA3Q9BTC8 594 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 UBA5Q9GZZ9 404 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 NR2E3Q9Y5X4 410 aa18.23■□□□□ 0.51
COL1A1-211ENST00000507689 PTPDC1A2A3K4 754 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 ASB14A6NK59 587 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 B4DLN1 442 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 RARBP10826 455 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 MRPL12P52815 198 aaKnown RBP18.22■□□□□ 0.51
COL1A1-211ENST00000507689 SEC23AQ15436 765 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 CHST3Q7LGC8 479 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 TMEM87BQ96K49 555 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 C11orf49Q9H6J7 331 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 VAT1LQ9HCJ6 419 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 A1CFQ9NQ94 594 aaKnown RBP18.22■□□□□ 0.51
COL1A1-211ENST00000507689 ADD3Q9UEY8 706 aaKnown RBP18.22■□□□□ 0.51
COL1A1-211ENST00000507689 ZHX1Q9UKY1 873 aaPredicted RBP18.22■□□□□ 0.51
COL1A1-211ENST00000507689 WDR19Q8NEZ3 1342 aa18.22■□□□□ 0.51
COL1A1-211ENST00000507689 DNAJC25-GNG10A0A024R161 153 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 KBTBD13C9JR72 458 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 KLRF2D3W0D1 207 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 PRC1O43663 620 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 EVI5O60447 810 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 AKR1A1P14550 325 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 KIF5BP33176 963 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 NECTIN1Q15223 517 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 CDC37Q16543 378 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-211ENST00000507689 USH1GQ495M9 461 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 ADGRF4Q8IZF3 695 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 CTCFLQ8NI51 663 aaPredicted RBP18.21■□□□□ 0.51
COL1A1-211ENST00000507689 NUP133Q8WUM0 1156 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 FAM184BQ9ULE4 1060 aa18.21■□□□□ 0.51
COL1A1-211ENST00000507689 FGD1P98174 961 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 LHX8Q68G74 356 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 MAMDC4Q6UXC1 1216 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 STOX1Q6ZVD7 989 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 MB21D2Q8IYB1 491 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-211ENST00000507689 ABHD16BQ9H3Z7 469 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 SPC25Q9HBM1 224 aa18.2■□□□□ 0.5
COL1A1-211ENST00000507689 ABCB11O95342 1321 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms