RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MED19A0JLT2 244 aaPredicted RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 MPHOSPH10O00566 681 aaKnown RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 ADCY6O43306 1168 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 STAT3P40763 770 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 PSMC6P62333 389 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 SEPT2Q15019 361 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 HERC4Q5GLZ8 1057 aaPredicted RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 GORABQ5T7V8 394 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 NAA16Q6N069 864 aaPredicted RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 TMCO2Q7Z6W1 182 aaPredicted RBP8.86□□□□□ -0.99
VCAN-207ENST00000507162 SPICE1Q8N0Z3 855 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 SPATA5Q8NB90 893 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 SLC43A3Q8NBI5 491 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 NEK9Q8TD19 979 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 XAGE2Q96GT9 111 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 CRBNQ96SW2 442 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 HMG20BQ9P0W2 317 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 MYO7AQ13402 2215 aa8.86□□□□□ -0.99
VCAN-207ENST00000507162 GRIN2DO15399 1336 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 PDS5AQ29RF7 1337 aaKnown RBP8.85□□□□□ -0.99
VCAN-207ENST00000507162 A0A1W2PRG0 241 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 CABYRO75952 493 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 CIAO1O76071 339 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 RGS20O76081 388 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 GUCY1A2P33402 732 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 IL15P40933 162 aaPredicted RBP8.85□□□□□ -0.99
VCAN-207ENST00000507162 KCNJ6P48051 423 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 KIAA1755Q5JYT7 1200 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 TATDN1Q6P1N9 297 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 WWC1Q8IX03 1113 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 FBXL6Q8N531 539 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 TGS1Q96RS0 853 aaKnown RBP8.85□□□□□ -0.99
VCAN-207ENST00000507162 UPF3AQ9H1J1 476 aaKnown RBP8.85□□□□□ -0.99
VCAN-207ENST00000507162 SERPINB13Q9UIV8 391 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 PA2G4Q9UQ80 394 aaKnown RBP8.85□□□□□ -0.99
VCAN-207ENST00000507162 SSUH2Q9Y2M2 353 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 CHD6Q8TD26 2715 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 ROBO3Q96MS0 1386 aa8.85□□□□□ -0.99
VCAN-207ENST00000507162 SPTBN2O15020 2390 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 A0A1B0GUL7 405 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 DYNC1LI2O43237 492 aaPredicted RBP8.84□□□□□ -0.99
VCAN-207ENST00000507162 ZEB2O60315 1214 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 KDM4AO75164 1064 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 USP5P45974 858 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 PPP4CP60510 307 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 MVPQ14764 893 aaKnown RBP8.84□□□□□ -0.99
VCAN-207ENST00000507162 CLUL1Q15846 466 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 RIOX2Q8IUF8 465 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 MSL3Q8N5Y2 521 aaKnown RBP8.84□□□□□ -0.99
VCAN-207ENST00000507162 RETREG2Q8NC44 543 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 CNTNAP3BQ96NU0 1288 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 CNTNAP3Q9BZ76 1288 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 USP44Q9H0E7 712 aa8.84□□□□□ -0.99
VCAN-207ENST00000507162 TRMT13Q9NUP7 481 aaKnown RBP8.84□□□□□ -0.99
VCAN-207ENST00000507162 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
VCAN-207ENST00000507162 VPS13AQ96RL7 3174 aa8.83□□□□□ -1
VCAN-207ENST00000507162 FANCIQ9NVI1 1328 aa8.83□□□□□ -1
VCAN-207ENST00000507162 CTAGE5O15320 804 aa8.83□□□□□ -1
VCAN-207ENST00000507162 SUPT20HL2P0C7V6 817 aa8.83□□□□□ -1
VCAN-207ENST00000507162 PRR29P0C7W0 189 aa8.83□□□□□ -1
VCAN-207ENST00000507162 AVPR2P30518 371 aa8.83□□□□□ -1
VCAN-207ENST00000507162 VCPP55072 806 aaKnown RBP8.83□□□□□ -1
VCAN-207ENST00000507162 ERVK-21P61565 698 aa8.83□□□□□ -1
VCAN-207ENST00000507162 DYNLL1P63167 89 aaKnown RBP8.83□□□□□ -1
VCAN-207ENST00000507162 TNFAIP2Q03169 654 aa8.83□□□□□ -1
VCAN-207ENST00000507162 FSCN1Q16658 493 aaKnown RBP8.83□□□□□ -1
VCAN-207ENST00000507162 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
VCAN-207ENST00000507162 DGLUCYQ7Z3D6 616 aa8.83□□□□□ -1
VCAN-207ENST00000507162 POP1Q99575 1024 aaKnown RBP8.83□□□□□ -1
VCAN-207ENST00000507162 FSD1Q9BTV5 496 aa8.83□□□□□ -1
VCAN-207ENST00000507162 SEZ6LQ9BYH1 1024 aa8.83□□□□□ -1
VCAN-207ENST00000507162 AP5M1Q9H0R1 490 aa8.83□□□□□ -1
VCAN-207ENST00000507162 ALDH8A1Q9H2A2 487 aaPredicted RBP8.83□□□□□ -1
VCAN-207ENST00000507162 ABHD16BQ9H3Z7 469 aa8.83□□□□□ -1
VCAN-207ENST00000507162 SNRKQ9NRH2 765 aa8.83□□□□□ -1
VCAN-207ENST00000507162 CLDND1Q9NY35 253 aa8.83□□□□□ -1
VCAN-207ENST00000507162 CTNNA3Q9UI47 895 aa8.83□□□□□ -1
VCAN-207ENST00000507162 FBXO3Q9UK99 471 aa8.83□□□□□ -1
VCAN-207ENST00000507162 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
VCAN-207ENST00000507162 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
VCAN-207ENST00000507162 ZNF236Q9UL36 1845 aa8.82□□□□□ -1
VCAN-207ENST00000507162 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
VCAN-207ENST00000507162 PRR23AA6NEV1 266 aa8.82□□□□□ -1
VCAN-207ENST00000507162 PROB1E7EW31 1015 aa8.82□□□□□ -1
VCAN-207ENST00000507162 STXBP3O00186 592 aa8.82□□□□□ -1
VCAN-207ENST00000507162 RAD21O60216 631 aa8.82□□□□□ -1
VCAN-207ENST00000507162 ZXDAP98168 799 aa8.82□□□□□ -1
VCAN-207ENST00000507162 MKRN4PQ13434 485 aaPredicted RBP8.82□□□□□ -1
VCAN-207ENST00000507162 PTPROQ16827 1216 aa8.82□□□□□ -1
VCAN-207ENST00000507162 TCEAL5Q5H9L2 206 aa8.82□□□□□ -1
VCAN-207ENST00000507162 MAMDC4Q6UXC1 1216 aa8.82□□□□□ -1
VCAN-207ENST00000507162 ADGRA1Q86SQ6 560 aa8.82□□□□□ -1
VCAN-207ENST00000507162 TTC6Q86TZ1 520 aa8.82□□□□□ -1
VCAN-207ENST00000507162 ADSSL1Q8N142 457 aa8.82□□□□□ -1
VCAN-207ENST00000507162 FBXO22Q8NEZ5 403 aa8.82□□□□□ -1
VCAN-207ENST00000507162 PABPC5Q96DU9 382 aaKnown RBP8.82□□□□□ -1
VCAN-207ENST00000507162 RAD9AQ99638 391 aa8.82□□□□□ -1
VCAN-207ENST00000507162 ALG13Q9NP73 1137 aaKnown RBP8.82□□□□□ -1
VCAN-207ENST00000507162 AKAP2Q9Y2D5 859 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms