RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
HMGCS1-203ENST00000507004 MFSD6Q6ZSS7 791 aa17.02■□□□□ 0.32
HMGCS1-203ENST00000507004 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
HMGCS1-203ENST00000507004 IL17RBQ9NRM6 502 aa17.02■□□□□ 0.32
HMGCS1-203ENST00000507004 ASB14A6NK59 587 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 SDSP20132 328 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 ADCYAP1R1P41586 468 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 B4GALNT3Q6L9W6 998 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 PLEKHM2Q8IWE5 1019 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 PCSK9Q8NBP7 692 aaKnown RBP17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 DIAPH3Q9NSV4 1193 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 RNF146Q9NTX7 359 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 ATP11BQ9Y2G3 1177 aa17.01■□□□□ 0.31
HMGCS1-203ENST00000507004 LOC102724159A0A0B4J2E5 919 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 SNAI1O95863 264 aaPredicted RBP17■□□□□ 0.31
HMGCS1-203ENST00000507004 ACVR2BQ13705 512 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 PWP2Q15269 919 aaKnown RBP17■□□□□ 0.31
HMGCS1-203ENST00000507004 BTNL9Q6UXG8 535 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 ESR2Q92731 530 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
HMGCS1-203ENST00000507004 PRR12Q9ULL5 1215 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
HMGCS1-203ENST00000507004 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 ZNF213O14771 459 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 ADAMTS4O75173 837 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 CST5P28325 142 aaPredicted RBP16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 CCDC96Q2M329 555 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 RRP12Q5JTH9 1297 aaKnown RBP16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 KCTD1Q719H9 257 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 FAM133AQ8N9E0 248 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 CTNNA3Q9UI47 895 aa16.99■□□□□ 0.31
HMGCS1-203ENST00000507004 ZNF536O15090 1300 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 MROH7Q68CQ1 1323 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 PGK1P00558 417 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 ICAM1P05362 532 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 ALAS1P13196 640 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 TRIM60Q495X7 471 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 ARMCX2Q7L311 632 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 IQCA1Q86XH1 822 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 KLHDC9Q8NEP7 349 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 TOX2Q96NM4 488 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 TMEM47Q9BQJ4 181 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 MAF1Q9H063 256 aa16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 A1CFQ9NQ94 594 aaKnown RBP16.98■□□□□ 0.31
HMGCS1-203ENST00000507004 ELP1O95163 1332 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 NMT2O60551 498 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 IGHDP01880 384 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 GPATCH4Q5T3I0 446 aaKnown RBP16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 AGBL1Q96MI9 1066 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 GLT1D1Q96MS3 346 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 MPHOSPH6Q99547 160 aaKnown RBP16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 DSCC1Q9BVC3 393 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 RANBP17Q9H2T7 1088 aaKnown RBP16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 STARD7Q9NQZ5 370 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 HOMER2Q9NSB8 354 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 ADD3Q9UEY8 706 aaKnown RBP16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 CCPG1Q9ULG6 757 aa16.97■□□□□ 0.31
HMGCS1-203ENST00000507004 SYNRGQ9UMZ2 1314 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 A0A1W2PQY0 241 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 ACLYP53396 1101 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 GJA9P57773 515 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 NKX3-2P78367 333 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 CCDC144CPQ8IYA2 1237 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 INCENPQ9NQS7 918 aa16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 PRDM5Q9NQX1 630 aaPredicted RBP16.96■□□□□ 0.31
HMGCS1-203ENST00000507004 DCDC2CA8MYV0 355 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 B4DLN1 442 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 SOX1O00570 391 aaPredicted RBP16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 CLTBP09497 229 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 PDHBP11177 359 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 MRPL12P52815 198 aaKnown RBP16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 HAND2P61296 217 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 TLE2Q04725 743 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 IMMTQ16891 758 aaKnown RBP16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 ANKRD33Q7Z3H0 272 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 LRCH3Q96II8 777 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 FGD4Q96M96 766 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 PDLIM7Q9NR12 457 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 CYP39A1Q9NYL5 469 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 Q9Y3F1 56 aa16.95■□□□□ 0.3
HMGCS1-203ENST00000507004 WDR19Q8NEZ3 1342 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms