RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RUFY1Q96T51 708 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 JPH2Q9BR39 696 aaPredicted RBP19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 PLA2G12BQ9BX93 195 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 TSGA10Q9BZW7 698 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 ERICH2A1L162 156 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 TRIM49BA6NDI0 452 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 RASSF10A6NK89 507 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 H0YHG0 523 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 DNM2P50570 870 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 TTC38Q5R3I4 469 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 STIM2Q9P246 746 aa19.09■□□□□ 0.65
SQSTM1-211ENST00000506690 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 NAP1L1P55209 391 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 NNTQ13423 1086 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 KDM7AQ6ZMT4 941 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 RETREG2Q8NC44 543 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 ZIM3Q96PE6 472 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 EPN3Q9H201 632 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 THAP9Q9H5L6 903 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 ZNHIT6Q9NWK9 470 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 SOS2Q07890 1332 aaPredicted RBP19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 PMS1P54277 932 aaKnown RBP19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 CDK17Q00537 523 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 SLC7A5Q01650 507 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 HAUS3Q68CZ6 603 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 NUP58Q9BVL2 599 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 SLAIN2Q9P270 581 aa19.08■□□□□ 0.64
SQSTM1-211ENST00000506690 C21orf2O43822 256 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 MBD4O95243 580 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 ARID4AP29374 1257 aaPredicted RBP19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 LSP1P33241 339 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 ZBED6P86452 979 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 CYP27A1Q02318 531 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 PPP2R5BQ15173 497 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 NAA35Q5VZE5 725 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 MICALCLQ6ZW33 695 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 SUFUQ9UMX1 484 aa19.07■□□□□ 0.64
SQSTM1-211ENST00000506690 ZNF263O14978 683 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 FUT2Q10981 343 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 SH2D3CQ8N5H7 860 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 VGLL2Q8N8G2 317 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 CAPN6Q9Y6Q1 641 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 NUTM2BA6NNL0 878 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 NUTM2EB1AL46 878 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 PES1O00541 588 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 CHUKO15111 745 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 TRIM21P19474 475 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 NPY5RQ15761 445 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 IL17AQ16552 155 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 IQCKQ8N0W5 287 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 TTLL11Q8NHH1 800 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 ZKSCAN4Q969J2 545 aaPredicted RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 OSBPL9Q96SU4 736 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 UBR2Q8IWV8 1755 aa19.06■□□□□ 0.64
SQSTM1-211ENST00000506690 PRPF3O43395 683 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 TACC1O75410 805 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 PRDM1O75626 825 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 ATP1A2P50993 1020 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 ARMT1Q9H993 441 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 EXOC1Q9NV70 894 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 LRWD1Q9UFC0 647 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 GGA2Q9UJY4 613 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 B4DLN1 442 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 CLSTN1O94985 981 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 KRT14P02533 472 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 PCCAP05165 728 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 PHKA1P46020 1223 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 MRPS25P82663 173 aaKnown RBP19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 APBA1Q02410 837 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 LDHAL6AQ6ZMR3 332 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 SMCR8Q8TEV9 937 aaPredicted RBP19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 VCPKMTQ9H867 229 aa19.05■□□□□ 0.64
SQSTM1-211ENST00000506690 TCP1P17987 556 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 SMTNP53814 917 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 KCTD16Q68DU8 428 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 ZNF473Q8WTR7 871 aaKnown RBP19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 FAM89AQ96GI7 184 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 DOCK2Q92608 1830 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 MYH10P35580 1976 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 ACTN3Q08043 901 aaPredicted RBP19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 SEC23AQ15436 765 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 CD248Q9HCU0 757 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 HYOU1Q9Y4L1 999 aa19.04■□□□□ 0.64
SQSTM1-211ENST00000506690 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 CLGNO14967 610 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 PPP1R37O75864 691 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 RASSF9O75901 435 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 UQCRFS1P1P0C7P4 283 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 MATR3P43243 847 aaKnown RBP eCLIP19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 KLK7P49862 253 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 PTGISQ16647 500 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 GLE1Q53GS7 698 aaKnown RBP19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 MAGEB6Q8N7X4 407 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 TUBGCP2Q9BSJ2 902 aa19.03■□□□□ 0.64
SQSTM1-211ENST00000506690 MAGEC2Q9UBF1 373 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms