RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
TRIO-208ENST00000506611 SLC14A2Q15849 920 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 KCNA10Q16322 511 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 ADGRF1Q5T601 910 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 KCNN1Q92952 543 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 DSCC1Q9BVC3 393 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 CRTAC1Q9NQ79 661 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 TNFRSF10DQ9UBN6 386 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.3
TRIO-208ENST00000506611 SMG5Q9UPR3 1016 aaKnown RBP6.9□□□□□ -1.3
TRIO-208ENST00000506611 A0A1W2PQH9 124 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 PEX10O60683 326 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 GSNP06396 782 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 FIBCD1Q8N539 461 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 SMARCC1Q92922 1105 aaPredicted RBP6.89□□□□□ -1.31
TRIO-208ENST00000506611 SHDQ96IW2 340 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 TOX2Q96NM4 488 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 JMJD8Q96S16 334 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 FHOD1Q9Y613 1164 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 SMARCA4P51532 1647 aa6.89□□□□□ -1.31
TRIO-208ENST00000506611 OR14I1A6ND48 311 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 NASPP49321 788 aaPredicted RBP6.88□□□□□ -1.31
TRIO-208ENST00000506611 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
TRIO-208ENST00000506611 LINC00310P59036 64 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 DLG4P78352 724 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 FBLN7Q53RD9 439 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 KLHL6Q8WZ60 621 aa6.88□□□□□ -1.31
TRIO-208ENST00000506611 FCRL3Q96P31 734 aaPredicted RBP6.88□□□□□ -1.31
TRIO-208ENST00000506611 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
TRIO-208ENST00000506611 TEX51A0A1B0GUA7 166 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 GSTM1P09488 218 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 PNLIPP16233 465 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 SPATA32Q96LK8 384 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 HAUS7Q99871 368 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 MCMBPQ9BTE3 642 aa6.87□□□□□ -1.31
TRIO-208ENST00000506611 NOL6Q9H6R4 1146 aaKnown RBP6.87□□□□□ -1.31
TRIO-208ENST00000506611 MBD1Q9UIS9 605 aaPredicted RBP6.87□□□□□ -1.31
TRIO-208ENST00000506611 TCAF2A6NFQ2 919 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 FGF10O15520 208 aaPredicted RBP6.86□□□□□ -1.31
TRIO-208ENST00000506611 SEMA7AO75326 666 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 IFNGR1P15260 489 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 PRKCAP17252 672 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 VIPR1P32241 457 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 KRTAP19-4Q3LI73 84 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 GALNT18Q6P9A2 607 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 C19orf47Q8N9M1 422 aaKnown RBP6.86□□□□□ -1.31
TRIO-208ENST00000506611 TGIF2Q9GZN2 237 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 KLHL25Q9H0H3 589 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 IMPACTQ9P2X3 320 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 SUSD2Q9UGT4 822 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 TAF6LQ9Y6J9 622 aa6.86□□□□□ -1.31
TRIO-208ENST00000506611 A0A1W2PQ45 241 aaPredicted RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 A0A1W2PQY0 241 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 WTIPA6NIX2 430 aaPredicted RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 ZSCAN22P10073 491 aaPredicted RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 EPHB3P54753 998 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 YBX1P67809 324 aaKnown RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 SRSF3P84103 164 aaKnown RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 SSPNQ14714 243 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 GNPTABQ3T906 1256 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 NOL9Q5SY16 702 aaKnown RBP6.85□□□□□ -1.31
TRIO-208ENST00000506611 ADCY4Q8NFM4 1077 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 CRBNQ96SW2 442 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 TNFRSF12AQ9NP84 129 aa6.85□□□□□ -1.31
TRIO-208ENST00000506611 HRKO00198 91 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 EPHX1P07099 455 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 ITGA4P13612 1032 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 ENDOUP21128 410 aaKnown RBP6.84□□□□□ -1.31
TRIO-208ENST00000506611 MVKQ03426 396 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 PPP2R5DQ14738 602 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.31
TRIO-208ENST00000506611 AMIGO3Q86WK7 504 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 ZNF513Q8N8E2 541 aaPredicted RBP6.84□□□□□ -1.31
TRIO-208ENST00000506611 NUP43Q8NFH3 380 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 ZDHHC15Q96MV8 337 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 PHAXQ9H814 394 aaKnown RBP6.84□□□□□ -1.31
TRIO-208ENST00000506611 CNTD2Q9H8S5 307 aa6.84□□□□□ -1.31
TRIO-208ENST00000506611 KRTAP9-7A8MTY7 169 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 OR6P1Q8NGX9 317 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 ZSCAN18Q8TBC5 510 aaPredicted RBP6.83□□□□□ -1.32
TRIO-208ENST00000506611 ZNF428Q96B54 188 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 FGD4Q96M96 766 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 EPB41L4AQ9HCS5 686 aaPredicted RBP6.83□□□□□ -1.32
TRIO-208ENST00000506611 WHRNQ9P202 907 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 KIF21AQ7Z4S6 1674 aa6.83□□□□□ -1.32
TRIO-208ENST00000506611 A0A087WZG4 1122 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 CD3EP07766 207 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 CASP7P55210 303 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 CYP4F8P98187 520 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 SLC7A5Q01650 507 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 TMEM132EQ6IEE7 984 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 SIAH1Q8IUQ4 282 aa6.82□□□□□ -1.32
TRIO-208ENST00000506611 PANK1Q8TE04 598 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms