RNA–Protein interactions for RNA: ENST00000506449.1

TRPC3-204, Transcript of transient receptor potential cation channel subfamily C member 3, humanhuman

TSL 1 (best)

Gene TRPC3, Length 2,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC3-204ENST00000506449 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRPC3-204ENST00000506449 SLC24A3Q9HC58 644 aa12.93□□□□□ -0.34
TRPC3-204ENST00000506449 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
TRPC3-204ENST00000506449 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
TRPC3-204ENST00000506449 SYNRGQ9UMZ2 1314 aa12.93□□□□□ -0.34
TRPC3-204ENST00000506449 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 TCRBV5S4A2TA0A5A2 114 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 GOLGA8KD6RF30 607 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 NEBLO76041 1014 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 CYP7A1P22680 504 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 ARID4AP29374 1257 aaPredicted RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 KRT9P35527 623 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 IMMTQ16891 758 aaKnown RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 PAPD7Q5XG87 772 aaKnown RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 CYB5R4Q7L1T6 521 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 EGFL6Q8IUX8 553 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 JAKMIP2Q96AA8 810 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 ATXN2Q99700 1313 aaKnown RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 NDUFA10O95299 355 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 PRDX5P30044 214 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 SKOR1P84550 965 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 CUL4BQ13620 913 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 KCTD16Q68DU8 428 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 IQCA1Q86XH1 822 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
TRPC3-204ENST00000506449 FBXO3Q9UK99 471 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 CNTNAP4Q9C0A0 1308 aa12.92□□□□□ -0.34
TRPC3-204ENST00000506449 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 GRIK5Q16478 980 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 FKBP15Q5T1M5 1219 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 TSEN2Q8NCE0 465 aaKnown RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 ZNF384Q8TF68 577 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 FBXO2Q9UK22 296 aaPredicted RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 N4BP3O15049 544 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 RASSF9O75901 435 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 GCFC2P16383 781 aaKnown RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 TOB1P50616 345 aaPredicted RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 WLSQ5T9L3 541 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 NAA35Q5VZE5 725 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 VPS16Q9H269 839 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 DMGDHQ9UI17 866 aaKnown RBP12.91□□□□□ -0.34
TRPC3-204ENST00000506449 WNK3Q9BYP7 1800 aa12.91□□□□□ -0.34
TRPC3-204ENST00000506449 PTPREP23469 700 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 TM4SF1P30408 202 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 AFMP43652 599 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 SMTNP53814 917 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 NAP1L1P55209 391 aaKnown RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 CKAP4Q07065 602 aaKnown RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 MAP3K12Q12852 859 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 CEP85LQ5SZL2 805 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 CCDC122Q5T0U0 273 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 MICU3Q86XE3 530 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 CCDC13Q8IYE1 715 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 FRMD3A2A2Y4 597 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 PATL2C9JE40 543 aaKnown RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 OPA1O60313 960 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 HERVK_113P62684 666 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 GUCY1A3Q02108 690 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 DPYDQ12882 1025 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 KRT31Q15323 416 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 KIRREL3Q8IZU9 778 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 SGSM3Q96HU1 749 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 RPGRIP1Q96KN7 1286 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 HAUS4Q9H6D7 363 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 SLC40A1Q9NP59 571 aa12.9□□□□□ -0.34
TRPC3-204ENST00000506449 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
TRPC3-204ENST00000506449 GYS1P13807 737 aa12.9□□□□□ -0.35
TRPC3-204ENST00000506449 LSP1P33241 339 aa12.9□□□□□ -0.35
TRPC3-204ENST00000506449 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.35
TRPC3-204ENST00000506449 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.35
TRPC3-204ENST00000506449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.35
TRPC3-204ENST00000506449 RNPC3Q96LT9 517 aaKnown RBP12.9□□□□□ -0.35
TRPC3-204ENST00000506449 NAPBQ9H115 298 aa12.9□□□□□ -0.35
TRPC3-204ENST00000506449 TAB2Q9NYJ8 693 aa12.9□□□□□ -0.35
TRPC3-204ENST00000506449 BTBD18B2RXH4 712 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 PDHBP11177 359 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 SEC24CP53992 1094 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 IFT88Q13099 833 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 SF3B3Q15393 1217 aaKnown RBP12.89□□□□□ -0.35
TRPC3-204ENST00000506449 TEX11Q8IYF3 940 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 IFNL3Q8IZI9 196 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
TRPC3-204ENST00000506449 AATFQ9NY61 560 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRPC3-204ENST00000506449 DDX20Q9UHI6 824 aaKnown RBP12.89□□□□□ -0.35
TRPC3-204ENST00000506449 GSG1L2A8MUP6 293 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms