RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 ATP2B1P20020 1258 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 PLA2G4AP47712 749 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
ITGA3-208ENST00000506437 SPP2Q13103 211 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 PPP2R5AQ15172 486 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 SYCP1Q15431 976 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 APOBEC3FQ8IUX4 373 aaKnown RBP13.05□□□□□ -0.32
ITGA3-208ENST00000506437 CTCFLQ8NI51 663 aaPredicted RBP13.05□□□□□ -0.32
ITGA3-208ENST00000506437 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
ITGA3-208ENST00000506437 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 SSC5DA1L4H1 1573 aa13.05□□□□□ -0.32
ITGA3-208ENST00000506437 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 GRM1Q13255 1194 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 TTC31Q49AM3 519 aaPredicted RBP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 CALR3Q96L12 384 aaKnown RBP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 FBXO28Q9NVF7 368 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 VPS54Q9P1Q0 977 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 HERC5Q9UII4 1024 aaKnown RBP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 ZHX2Q9Y6X8 837 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 SHISA4Q96DD7 197 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 KLRF2D3W0D1 207 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 F5H6K3 240 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 MBD3O95983 291 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 PDHBP11177 359 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 KLRC3Q07444 240 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 FKBP1CQ5VVH2 108 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 LRRN4CLQ8ND94 238 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
ITGA3-208ENST00000506437 ELP3Q9H9T3 547 aa13.04□□□□□ -0.32
ITGA3-208ENST00000506437 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 IQCA1LA6NCM1 817 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 EVCP57679 992 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 MTMR2Q13614 643 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 TMEM179Q6ZVK1 233 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 HTTP42858 3142 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 H3BQV1 296 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 STX6O43752 255 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 SLC1A4P43007 532 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 NOM1Q5C9Z4 860 aaKnown RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 IFFO2Q5TF58 517 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 USP50Q70EL3 339 aaPredicted RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 ALG1Q9BT22 464 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
ITGA3-208ENST00000506437 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
ITGA3-208ENST00000506437 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.32
ITGA3-208ENST00000506437 NDUFB10O96000 172 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 BIRC2Q13490 618 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 VGLL4Q14135 290 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 FAM83BQ5T0W9 1011 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 SLFN13Q68D06 897 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 CCDC186Q7Z3E2 898 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 KLRG1Q96E93 195 aa13.02□□□□□ -0.32
ITGA3-208ENST00000506437 USP27XA6NNY8 438 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 PARP1P09874 1014 aaKnown RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 ERCC6LQ2NKX8 1250 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 FOXR1Q6PIV2 292 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 OTUD5Q96G74 571 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 PIGSQ96S52 555 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 WDR19Q8NEZ3 1342 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 TCHHQ07283 1943 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 USP17L10C9JJH3 530 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 TMEM232C9JQI7 657 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 HMGCS2P54868 508 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
ITGA3-208ENST00000506437 TFIP11Q9UBB9 837 aaKnown RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.02□□□□□ -0.33
ITGA3-208ENST00000506437 PNMA6AP0CW24 399 aaPredicted RBP13.01□□□□□ -0.33
ITGA3-208ENST00000506437 TMTC3Q6ZXV5 915 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 RASGRP4Q8TDF6 673 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 COA7Q96BR5 231 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 TYW1BQ6NUM6 668 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 FBXL16Q8N461 479 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 PRPF38AQ8NAV1 312 aaKnown RBP13.01□□□□□ -0.33
ITGA3-208ENST00000506437 SMARCC2Q8TAQ2 1214 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 UIMC1Q96RL1 719 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 TCP11L1Q9NUJ3 509 aa13.01□□□□□ -0.33
ITGA3-208ENST00000506437 CLCN6P51797 869 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 USH1GQ495M9 461 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 HEATR3Q7Z4Q2 680 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 KIFC2Q96AC6 838 aa13□□□□□ -0.33
ITGA3-208ENST00000506437 C8orf76Q96K31 380 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms